RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	STP2	P38704	541 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	NDT80	P38830	627 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	YIL067C	P40514	678 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	TOS3	P43637	560 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	RTT102	P53330	157 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	TOF1	P53840	1238 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	ALF1	P53904	254 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	HXT11	P54862	567 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	YDR286C	Q05530	114 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	ECM7	Q06200	448 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	IPK1	Q06667	281 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	AAD15	Q08361	143 aa		2.75	□□□□□ -1.97
SRD1	YCR018C	OPI3	P05375	206 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	PHO2	P07269	559 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	CPR3	P25719	182 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	DEG1	P31115	442 aa	Known RBP	2.74	□□□□□ -1.97
SRD1	YCR018C	ANP1	P32629	500 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
SRD1	YCR018C	YBL059W	P34224	193 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	SPP381	P38282	291 aa	Predicted RBP	2.74	□□□□□ -1.97
SRD1	YCR018C	TIF5	P38431	405 aa	Known RBP	2.74	□□□□□ -1.97
SRD1	YCR018C	YHR218W	P38899	603 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	KRE9	P39005	276 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	COX14	P39103	70 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	PRM5	P40476	318 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	CHS6	P40955	746 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	SPR6	Q01684	191 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	TSR1	Q07381	788 aa	Known RBP	2.74	□□□□□ -1.97
SRD1	YCR018C	RNH203	Q12338	110 aa		2.74	□□□□□ -1.97
SRD1	YCR018C	HHF1	P02309	103 aa	Known RBP	2.73	□□□□□ -1.97
SRD1	YCR018C	TPK3	P05986	398 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	DAP2	P18962	818 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	TRX1	P22217	103 aa	Known RBP	2.73	□□□□□ -1.97
SRD1	YCR018C	UBA1	P22515	1024 aa	Known RBP	2.73	□□□□□ -1.97
SRD1	YCR018C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
SRD1	YCR018C	SKT5	P34226	696 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	YKL097C	P34245	136 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	PTH1	P38876	190 aa	Known RBP	2.73	□□□□□ -1.97
SRD1	YCR018C	YIL029C	P40538	142 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	STE24	P47154	453 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	RRP46	P53256	223 aa	Predicted RBP	2.73	□□□□□ -1.97
SRD1	YCR018C	AQR1	P53943	586 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	PRP3	Q03338	469 aa	Predicted RBP	2.73	□□□□□ -1.97
SRD1	YCR018C	HER2	Q03557	464 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	URC2	Q04411	772 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	RTT103	Q05543	409 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	PBA1	Q05778	276 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	DBP9	Q06218	594 aa	Known RBP	2.73	□□□□□ -1.97
SRD1	YCR018C	RAX1	Q08760	435 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	PGC1	Q08959	321 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	YRM1	Q12340	786 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	YER078W-A	Q3E7A2	54 aa		2.73	□□□□□ -1.97
SRD1	YCR018C	POM152	P39685	1337 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	TRP1	P00912	224 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	RPL12A	P0CX53	165 aa	Known RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	RPL12B	P0CX54	165 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	SCH9	P11792	824 aa	Known RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	CAP2	P13517	287 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	EXG1	P23776	448 aa	Known RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	FAA1	P30624	700 aa	Known RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	SPT10	P35208	640 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	ADH5	P38113	351 aa	Known RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	SIF2	P38262	535 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	YBR137W	P38276	179 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	CCT4	P39078	528 aa	Known RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	JLP2	P40206	208 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	YIL089W	P40500	205 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	SNL1	P40548	159 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	RPA34	P47006	233 aa	Predicted RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	CUE3	P53137	624 aa	Known RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	YGR117C	P53270	476 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	TRM112	P53738	135 aa	Predicted RBP	2.72	□□□□□ -1.97
SRD1	YCR018C	NUP116	Q02630	1113 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	LDS2	Q08218	356 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	PEX27	Q08580	376 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	YOR387C	Q08910	206 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	NBL1	Q3E7Y6	73 aa		2.72	□□□□□ -1.97
SRD1	YCR018C	STF1	P01098	86 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	NAM2	P11325	894 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	SPT15	P13393	240 aa	Known RBP	2.71	□□□□□ -1.98
SRD1	YCR018C	VMA2	P16140	517 aa	Known RBP	2.71	□□□□□ -1.98
SRD1	YCR018C	KRR1	P25586	316 aa	Predicted RBP	2.71	□□□□□ -1.98
SRD1	YCR018C	YEF1	P32622	495 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	MNS1	P32906	549 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	SIM1	P40472	476 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	PMT5	P52867	743 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	MPS2	P53159	387 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	CWC25	P53854	179 aa	Known RBP	2.71	□□□□□ -1.98
SRD1	YCR018C	IMP4	P53941	290 aa	Known RBP	2.71	□□□□□ -1.98
SRD1	YCR018C	MTQ1	P53944	314 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	ASA1	Q06822	443 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	YOP1	Q12402	180 aa		2.71	□□□□□ -1.98
SRD1	YCR018C	CBS2	P14905	389 aa		2.7	□□□□□ -1.98
SRD1	YCR018C	TPM1	P17536	199 aa	Known RBP	2.7	□□□□□ -1.98
SRD1	YCR018C	DAL2	P25335	343 aa		2.7	□□□□□ -1.98
SRD1	YCR018C	YEL043W	P32618	956 aa		2.7	□□□□□ -1.98
SRD1	YCR018C	UIP5	P36137	443 aa		2.7	□□□□□ -1.98
SRD1	YCR018C	POP2	P39008	433 aa		2.7	□□□□□ -1.98
SRD1	YCR018C	MAM33	P40513	266 aa		2.7	□□□□□ -1.98
SRD1	YCR018C	MDE1	P47095	244 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms