RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeast

Gene LDB16, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB16	YCL005W	BIO3	P50277	480 aa		6.1	□□□□□ -1.43
LDB16	YCL005W	RTS3	P53289	263 aa		6.1	□□□□□ -1.43
LDB16	YCL005W	SPR6	Q01684	191 aa		6.1	□□□□□ -1.43
LDB16	YCL005W	CTK1	Q03957	528 aa	Known RBP	6.1	□□□□□ -1.43
LDB16	YCL005W	ENT2	Q05785	613 aa		6.1	□□□□□ -1.43
LDB16	YCL005W	NBA1	Q08229	501 aa	Known RBP	6.1	□□□□□ -1.43
LDB16	YCL005W	PFA4	Q12006	378 aa		6.1	□□□□□ -1.43
LDB16	YCL005W	SRO7	Q12038	1033 aa		6.1	□□□□□ -1.43
LDB16	YCL005W	YOR114W	Q12219	294 aa		6.1	□□□□□ -1.43
LDB16	YCL005W	WTM1	Q12363	437 aa	Known RBP	6.1	□□□□□ -1.43
LDB16	YCL005W	COX3	P00420	269 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	RED1	P14291	827 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	CMP2	P14747	604 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	IDH2	P28241	369 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	UBC8	P28263	218 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	RPC82	P32349	654 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	SSE2	P32590	693 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	SPC42	P36094	363 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	TCD2	P36101	447 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	APT2	P36973	181 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	MUM2	P38236	366 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	TSL1	P38427	1098 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	PMT4	P46971	762 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	YJL043W	P47053	257 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	EMC2	P47133	292 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	ERG26	P53199	349 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	ROY1	Q04847	553 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	DBP9	Q06218	594 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	ARR1	Q06596	294 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	DTD1	Q07648	150 aa	Known RBP	6.09	□□□□□ -1.43
LDB16	YCL005W	YLR122C	Q12312	125 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	YDL199C	Q12407	687 aa		6.09	□□□□□ -1.43
LDB16	YCL005W	MSB2	P32334	1306 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	RPS17A	P02407	136 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	RPS17B	P14127	136 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	TYR1	P20049	452 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	GRR1	P24814	1151 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	ARE1	P25628	610 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	ADE1	P27616	306 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	CTS1	P29029	562 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	SSO1	P32867	290 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	SFC1	P33303	322 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	TIF3	P34167	436 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	SRX1	P36077	127 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	PIM1	P36775	1133 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	ASC1	P38011	319 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	ARA1	P38115	344 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	MET30	P39014	640 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	TIF34	P40217	347 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	LAS21	P40367	830 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	ZIM17	P42844	174 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	FAR7	P43592	221 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	GPI8	P49018	411 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	TMA20	P89886	181 aa	Predicted RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	OAZ1	Q02803	292 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	SRP1	Q02821	542 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	RRN5	Q02983	363 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	RRT8	Q08219	342 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	REX4	Q08237	289 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	RPN8	Q08723	338 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	DBP10	Q12389	995 aa	Known RBP	6.08	□□□□□ -1.44
LDB16	YCL005W	YLR111W	Q12528	110 aa		6.08	□□□□□ -1.44
LDB16	YCL005W	YMR084W	A2P2R3	262 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	TIM9	O74700	87 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	RHO1	P06780	209 aa	Known RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	STE7	P06784	515 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	COR1	P07256	457 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	ALG7	P07286	448 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	KSS1	P14681	368 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	SAM35	P14693	329 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	CBS2	P14905	389 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	TAL1	P15019	335 aa	Known RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	SNF5	P18480	905 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	PPH21	P23594	369 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	PTP2	P29461	750 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	DOM34	P33309	386 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	PFS1	P38872	237 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	YAL037W	P39728	267 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	YEL020C	P39994	560 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	YIL108W	P40483	696 aa	Known RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	YRB2	P40517	327 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	PSA1	P41940	361 aa	Known RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	PRM10	P42946	383 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	ALR2	P43553	858 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
LDB16	YCL005W	MNN10	P50108	393 aa	Known RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	YGR250C	P53316	781 aa	Known RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	RHO3	Q00245	231 aa	Known RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	MTQ2	Q03920	221 aa	Predicted RBP	6.07	□□□□□ -1.44
LDB16	YCL005W	PDR8	Q06149	701 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	YLR036C	Q07986	203 aa		6.07	□□□□□ -1.44
LDB16	YCL005W	CNA1	P23287	553 aa		6.06	□□□□□ -1.44
LDB16	YCL005W	YCL049C	P25577	312 aa		6.06	□□□□□ -1.44
LDB16	YCL005W	SAC1	P32368	623 aa	Known RBP	6.06	□□□□□ -1.44
LDB16	YCL005W	CYS4	P32582	507 aa	Known RBP	6.06	□□□□□ -1.44
LDB16	YCL005W	LHS1	P36016	881 aa		6.06	□□□□□ -1.44
LDB16	YCL005W	MNN2	P38069	597 aa		6.06	□□□□□ -1.44
LDB16	YCL005W	YBR285W	P38354	144 aa		6.06	□□□□□ -1.44
LDB16	YCL005W	YHR033W	P38690	423 aa		6.06	□□□□□ -1.44
LDB16	YCL005W	STP2	P38704	541 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms