RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	STE23	Q06010	1027 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	SFH1	Q06168	426 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	OCA6	Q12454	224 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	AFI1	Q99222	893 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	COX5A	P00424	153 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	TEF1	P02994	458 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	CMK1	P27466	446 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	URA7	P28274	579 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	SNC1	P31109	117 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	NDC1	P32500	655 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	KAR9	P32526	644 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	MRS6	P32864	603 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	LOS1	P33418	1100 aa	Predicted RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	COY1	P34237	679 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	SNU114	P36048	1008 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	DBP8	P38719	431 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	SMF2	P38778	549 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	YHR131C	P38835	850 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	DLD2	P46681	530 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	URB2	P47108	1174 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	ASN2	P49090	572 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	TIM13	P53299	105 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	BOR1	P53838	576 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	YPL014W	Q02606	381 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	ENT5	Q03769	411 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	YLR012C	Q07927	99 aa		4.07	□□□□□ -1.76
SLX1	YBR228W	CUE5	Q08412	411 aa	Known RBP	4.07	□□□□□ -1.76
SLX1	YBR228W	AAT2	P23542	418 aa	Known RBP	4.06	□□□□□ -1.76
SLX1	YBR228W	URA10	P30402	227 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	VPS17	P32913	551 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	UIP3	P39547	235 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	HEM14	P40012	539 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	IES5	P40060	125 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	YFL012W	P43580	148 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	KTR5	P53966	522 aa	Predicted RBP	4.06	□□□□□ -1.76
SLX1	YBR228W	DIC1	Q06143	298 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	PGC1	Q08959	321 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	RUD3	Q12234	484 aa	Known RBP	4.06	□□□□□ -1.76
SLX1	YBR228W	LDB17	Q12342	491 aa		4.06	□□□□□ -1.76
SLX1	YBR228W	ARG81	P05085	880 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	ARF2	P19146	181 aa	Known RBP	4.05	□□□□□ -1.76
SLX1	YBR228W	MCK1	P21965	375 aa	Known RBP	4.05	□□□□□ -1.76
SLX1	YBR228W	MRPL25	P23369	157 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	YCL068C	P25593	260 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	NDI1	P32340	513 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	SMI1	P32566	505 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	SWE1	P32944	819 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	YKL097C	P34245	136 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	ECM15	P35195	104 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	SWH1	P35845	1188 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	MRPL40	P36534	297 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	MED6	P38782	295 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	DPH1	P40487	425 aa	Known RBP	4.05	□□□□□ -1.76
SLX1	YBR228W	CHS6	P40955	746 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	SPG5	P42933	373 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	CTK3	P46963	296 aa	Predicted RBP	4.05	□□□□□ -1.76
SLX1	YBR228W	CDC14	Q00684	551 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	RLI1	Q03195	608 aa	Known RBP	4.05	□□□□□ -1.76
SLX1	YBR228W	CMS1	Q07897	291 aa	Known RBP	4.05	□□□□□ -1.76
SLX1	YBR228W	SLD7	Q08457	257 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	YLR046C	Q12253	270 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	PEX11	Q12462	236 aa		4.05	□□□□□ -1.76
SLX1	YBR228W	GPA2	P10823	449 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	CLN1	P20437	546 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	DAL81	P21657	970 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	MRPL8	P22353	238 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	SGF29	P25554	259 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	GEX1	P25596	615 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	PEX5	P35056	612 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	ETR1	P38071	380 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	CIN4	P39110	191 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	RPR2	P40571	144 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	ERG10	P41338	398 aa	Known RBP	4.04	□□□□□ -1.76
SLX1	YBR228W	BUD13	P46947	266 aa	Predicted RBP	4.04	□□□□□ -1.76
SLX1	YBR228W	VEL1	P53058	206 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	SAM50	P53969	484 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	SLT2	Q00772	484 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	RPM2	Q02773	1202 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	PIR1	Q03178	341 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	BUD22	Q04347	519 aa	Known RBP	4.04	□□□□□ -1.76
SLX1	YBR228W	YET3	Q07451	203 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	LDB18	Q07887	179 aa		4.04	□□□□□ -1.76
SLX1	YBR228W	RPS14A	P06367	137 aa	Known RBP	4.03	□□□□□ -1.76
SLX1	YBR228W	SSC1	P0CS90	654 aa	Known RBP	4.03	□□□□□ -1.76
SLX1	YBR228W	SCH9	P11792	824 aa	Known RBP	4.03	□□□□□ -1.76
SLX1	YBR228W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SLX1	YBR228W	RBK1	P25332	333 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	RPS2	P25443	254 aa	Known RBP	4.03	□□□□□ -1.76
SLX1	YBR228W	PUP3	P25451	205 aa	Known RBP	4.03	□□□□□ -1.76
SLX1	YBR228W	DCC1	P25559	380 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	YCR051W	P25631	222 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	ALY1	P36117	915 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	LAG1	P38703	411 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	RPS14B	P39516	138 aa	Known RBP	4.03	□□□□□ -1.76
SLX1	YBR228W	PAN6	P40459	309 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	YPI1	P43587	155 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	RMD8	P43620	662 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	AIM23	P47015	356 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	IPI3	P53877	555 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	YMR087W	Q04299	284 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms