RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YOL073CQ08232 322 aa2.14□□□□□ -2.07
NUP170YBL079W RRP40Q08285 240 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W YCP4P25349 247 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W CSM1P25651 190 aa2.14□□□□□ -2.07
NUP170YBL079W EHD3P28817 500 aa2.14□□□□□ -2.07
NUP170YBL079W CDC11P32458 415 aa2.14□□□□□ -2.07
NUP170YBL079W NPL6P32832 435 aa2.14□□□□□ -2.07
NUP170YBL079W YKL102CP34249 101 aa2.14□□□□□ -2.07
NUP170YBL079W GPX1P36014 167 aa2.14□□□□□ -2.07
NUP170YBL079W PIG2P40187 538 aa2.14□□□□□ -2.07
NUP170YBL079W GCD10P41814 478 aa2.14□□□□□ -2.07
NUP170YBL079W UPF3P48412 387 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W SLI1P53304 468 aa2.14□□□□□ -2.07
NUP170YBL079W APM1Q00776 475 aaPredicted RBP2.14□□□□□ -2.07
NUP170YBL079W ATP25Q03153 612 aa2.14□□□□□ -2.07
NUP170YBL079W LRS4Q04087 347 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W CRR1Q05790 422 aa2.14□□□□□ -2.07
NUP170YBL079W RRT8Q08219 342 aa2.14□□□□□ -2.07
NUP170YBL079W YDL177CQ12257 170 aa2.14□□□□□ -2.07
NUP170YBL079W CCH1P50077 2039 aa2.14□□□□□ -2.07
NUP170YBL079W MCK1P21965 375 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W RAD57P25301 460 aa2.14□□□□□ -2.07
NUP170YBL079W AAD3P25612 363 aa2.14□□□□□ -2.07
NUP170YBL079W YCR015CP25616 317 aa2.14□□□□□ -2.07
NUP170YBL079W YCR099CP25657 155 aa2.14□□□□□ -2.07
NUP170YBL079W ERG9P29704 444 aa2.14□□□□□ -2.07
NUP170YBL079W LYP1P32487 611 aa2.14□□□□□ -2.07
NUP170YBL079W SCO2P38072 301 aa2.14□□□□□ -2.07
NUP170YBL079W SLZ1P40167 298 aa2.14□□□□□ -2.07
NUP170YBL079W PRM10P42946 383 aa2.14□□□□□ -2.07
NUP170YBL079W YGR067CP53243 804 aa2.14□□□□□ -2.07
NUP170YBL079W YPL067CQ02754 198 aa2.14□□□□□ -2.07
NUP170YBL079W NAN1Q02931 896 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W RBS1Q05672 457 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W YIG1Q08956 461 aa2.14□□□□□ -2.07
NUP170YBL079W CLB4P24871 460 aa2.13□□□□□ -2.07
NUP170YBL079W STE50P25344 346 aa2.13□□□□□ -2.07
NUP170YBL079W EAP1P36041 632 aaKnown RBP2.13□□□□□ -2.07
NUP170YBL079W CAF4P36130 643 aa2.13□□□□□ -2.07
NUP170YBL079W YDR089WP38966 869 aa2.13□□□□□ -2.07
NUP170YBL079W HOS4P40480 1083 aa2.13□□□□□ -2.07
NUP170YBL079W TWF1P53250 332 aa2.13□□□□□ -2.07
NUP170YBL079W COG2P53271 262 aa2.13□□□□□ -2.07
NUP170YBL079W TIM13P53299 105 aa2.13□□□□□ -2.07
NUP170YBL079W FRE4P53746 719 aa2.13□□□□□ -2.07
NUP170YBL079W LGE1Q02796 332 aaKnown RBP2.13□□□□□ -2.07
NUP170YBL079W YPR174CQ06616 221 aaPredicted RBP2.13□□□□□ -2.07
NUP170YBL079W BUD20Q08004 166 aaPredicted RBP2.13□□□□□ -2.07
NUP170YBL079W UPC2Q12151 913 aa2.13□□□□□ -2.07
NUP170YBL079W YDL180WQ12301 547 aa2.13□□□□□ -2.07
NUP170YBL079W VCX1Q99385 411 aa2.13□□□□□ -2.07
NUP170YBL079W YHR210CP38893 341 aa2.13□□□□□ -2.07
NUP170YBL079W YIL166CP40445 542 aa2.13□□□□□ -2.07
NUP170YBL079W EFM4P40516 257 aa2.13□□□□□ -2.07
NUP170YBL079W REE1P40893 198 aa2.13□□□□□ -2.07
NUP170YBL079W JHD2P47156 728 aaPredicted RBP2.13□□□□□ -2.07
NUP170YBL079W IRC19Q07843 230 aa2.13□□□□□ -2.07
NUP170YBL079W ENB1Q08299 606 aa2.13□□□□□ -2.07
NUP170YBL079W BDS1Q08347 646 aa2.13□□□□□ -2.07
NUP170YBL079W TAD3Q9URQ3 322 aa2.13□□□□□ -2.07
NUP170YBL079W MSN1P22148 382 aa2.13□□□□□ -2.07
NUP170YBL079W LOS1P33418 1100 aaPredicted RBP2.13□□□□□ -2.07
NUP170YBL079W RPP1P38786 293 aa2.13□□□□□ -2.07
NUP170YBL079W SSZ1P38788 538 aaKnown RBP2.13□□□□□ -2.07
NUP170YBL079W RGA1P39083 1007 aa2.13□□□□□ -2.07
NUP170YBL079W YER010CP40011 234 aa2.13□□□□□ -2.07
NUP170YBL079W LYS12P40495 371 aaKnown RBP2.13□□□□□ -2.07
NUP170YBL079W TES1P41903 349 aaKnown RBP2.13□□□□□ -2.07
NUP170YBL079W STB2P46679 850 aa2.13□□□□□ -2.07
NUP170YBL079W GYP1Q08484 637 aa2.13□□□□□ -2.07
NUP170YBL079W MMT2Q08970 484 aa2.13□□□□□ -2.07
NUP170YBL079W PUT2P07275 575 aa2.12□□□□□ -2.07
NUP170YBL079W UNG1P12887 359 aa2.12□□□□□ -2.07
NUP170YBL079W AGP1P25376 633 aa2.12□□□□□ -2.07
NUP170YBL079W PHO91P27514 894 aa2.12□□□□□ -2.07
NUP170YBL079W MDH3P32419 343 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
NUP170YBL079W MNN2P38069 597 aa2.12□□□□□ -2.07
NUP170YBL079W ZTA1P38230 334 aaKnown RBP2.12□□□□□ -2.07
NUP170YBL079W SEN34P39707 275 aa2.12□□□□□ -2.07
NUP170YBL079W NOP16P40007 231 aaKnown RBP2.12□□□□□ -2.07
NUP170YBL079W GPP1P41277 250 aaKnown RBP2.12□□□□□ -2.07
NUP170YBL079W MSY1P48527 492 aa2.12□□□□□ -2.07
NUP170YBL079W TLG1Q03322 224 aa2.12□□□□□ -2.07
NUP170YBL079W SOV1Q04748 898 aa2.12□□□□□ -2.07
NUP170YBL079W YPR196WQ06595 470 aa2.12□□□□□ -2.07
NUP170YBL079W SYO1Q07395 620 aa2.12□□□□□ -2.07
NUP170YBL079W GRE1Q08969 168 aa2.12□□□□□ -2.07
NUP170YBL079W YLR149CQ99296 730 aa2.12□□□□□ -2.07
NUP170YBL079W FUM1P08417 488 aaKnown RBP2.12□□□□□ -2.07
NUP170YBL079W SSC1P0CS90 654 aaKnown RBP2.12□□□□□ -2.07
NUP170YBL079W NGG1P32494 702 aa2.12□□□□□ -2.07
NUP170YBL079W NUP2P32499 720 aa2.12□□□□□ -2.07
NUP170YBL079W BCK2P33306 851 aa2.12□□□□□ -2.07
NUP170YBL079W FES1P38260 290 aa2.12□□□□□ -2.07
NUP170YBL079W YJL206CP39529 758 aa2.12□□□□□ -2.07
NUP170YBL079W UBP6P43593 499 aaKnown RBP2.12□□□□□ -2.07
NUP170YBL079W AIM22P47051 409 aa2.12□□□□□ -2.07
NUP170YBL079W HST3P53687 447 aa2.12□□□□□ -2.07
NUP170YBL079W ARC35P53731 342 aaKnown RBP2.12□□□□□ -2.07
NUP170YBL079W ELA1P53861 379 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms