RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 MMP3P08254 477 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 ZNF286BP0CG31 522 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 GNA11P29992 359 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 NLRP5P59047 1200 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 QRICH1Q2TAL8 776 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 ZNF618Q5T7W0 954 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 FBXO11Q86XK2 927 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 BICD2Q8TD16 824 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 KAT2BQ92831 832 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 AIFM3Q96NN9 605 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 RAD9AQ99638 391 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 VPS54Q9P1Q0 977 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 PLXNA3P51805 1871 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 STXBP3O00186 592 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 DCXO43602 365 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 MMP1P03956 469 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 ALADP13716 330 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 FOSBP53539 338 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 NAPAP54920 295 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 PTPN11Q06124 597 aaPredicted RBP10.5□□□□□ -0.73
SYN3-213ENST00000619146 GNL2Q13823 731 aaKnown RBP10.5□□□□□ -0.73
SYN3-213ENST00000619146 PKP1Q13835 747 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 MBTPS1Q14703 1052 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 TCEAL5Q5H9L2 206 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 WWC2Q6AWC2 1192 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 MCTP1Q6DN14 999 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 HFE2Q6ZVN8 426 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 BRAPQ7Z569 592 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 DAGLBQ8NCG7 672 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 CAGE1Q8TC20 777 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 PHF20Q9BVI0 1012 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 OSBPL7Q9BZF2 842 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
SYN3-213ENST00000619146 C6orf50Q9HD87 102 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 CLDND1Q9NY35 253 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 LMCD1Q9NZU5 365 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
SYN3-213ENST00000619146 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
SYN3-213ENST00000619146 KPNA6O60684 536 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 F13A1P00488 732 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 KRT2P35908 639 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 PSEN2P49810 448 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 MRPL12P52815 198 aaKnown RBP10.49□□□□□ -0.73
SYN3-213ENST00000619146 GUCY1B3Q02153 619 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 ARHGAP1Q07960 439 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 GPM6BQ13491 265 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 IKBKEQ14164 716 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 HIC1Q14526 733 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 EPC2Q52LR7 807 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 MCTP2Q6DN12 878 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 C7orf31Q8N865 590 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.73
SYN3-213ENST00000619146 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
SYN3-213ENST00000619146 TAAR1Q96RJ0 339 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 MUTYHQ9UIF7 546 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 ZDHHC9Q9Y397 364 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 MRPL11Q9Y3B7 192 aaKnown RBP10.49□□□□□ -0.73
SYN3-213ENST00000619146 TTC3P53804 2025 aa10.49□□□□□ -0.73
SYN3-213ENST00000619146 FNDC1Q4ZHG4 1894 aaPredicted RBP10.49□□□□□ -0.73
SYN3-213ENST00000619146 ABHD14A-ACY1A0A1B0GW23 586 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 PPP1R11O60927 126 aaPredicted RBP10.48□□□□□ -0.73
SYN3-213ENST00000619146 GH1P01241 217 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 CXCL10P02778 98 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 EDNRBP24530 442 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 U2AF2P26368 475 aaKnown RBP eCLIP10.48□□□□□ -0.73
SYN3-213ENST00000619146 IRS1P35568 1242 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 ADCY7P51828 1080 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 ZP2Q05996 745 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 RESTQ13127 1097 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 MFSD10Q14728 455 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 KIAA0753Q2KHM9 967 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 ATL3Q6DD88 541 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 CCDC62Q6P9F0 684 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 DHX37Q8IY37 1157 aaKnown RBP10.48□□□□□ -0.73
SYN3-213ENST00000619146 DIS3L2Q8IYB7 885 aaKnown RBP10.48□□□□□ -0.73
SYN3-213ENST00000619146 BLIDQ8IZY5 108 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 BANK1Q8NDB2 785 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 DBF4BQ8NFT6 615 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 TNPO1Q92973 898 aaKnown RBP10.48□□□□□ -0.73
SYN3-213ENST00000619146 CUL5Q93034 780 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 MRPL38Q96DV4 380 aaKnown RBP10.48□□□□□ -0.73
SYN3-213ENST00000619146 SNX27Q96L92 541 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 GBP4Q96PP9 640 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 MPHOSPH6Q99547 160 aaKnown RBP10.48□□□□□ -0.73
SYN3-213ENST00000619146 MAF1Q9H063 256 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 PSTPIP2Q9H939 334 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 GJB4Q9NTQ9 266 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 COL20A1Q9P218 1284 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 GTF2IRD1Q9UHL9 959 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 KCNJ14Q9UNX9 436 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 ABCB11O95342 1321 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 VPS13AQ96RL7 3174 aa10.48□□□□□ -0.73
SYN3-213ENST00000619146 PTPRZ1P23471 2315 aaPredicted RBP10.47□□□□□ -0.73
SYN3-213ENST00000619146 WDR81Q562E7 1941 aa10.47□□□□□ -0.73
SYN3-213ENST00000619146 BTBD18B2RXH4 712 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms