RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-238ENST00000570150 ZNF302Q9NR11 478 aa20.32■□□□□ 0.84
PKD1-238ENST00000570150 NOL7Q9UMY1 257 aaKnown RBP20.32■□□□□ 0.84
PKD1-238ENST00000570150 IGKV6D-21A0A0A0MT36 114 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 MSH4O15457 936 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 HBP1O60381 514 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 SELPP16109 830 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 PDCP20941 246 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 SMC3Q9UQE7 1217 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 TRPC6Q9Y210 931 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 LAMA3Q16787 3333 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 COL1A2P08123 1366 aa20.31■□□□□ 0.84
PKD1-238ENST00000570150 SOX1O00570 391 aaPredicted RBP20.3■□□□□ 0.84
PKD1-238ENST00000570150 EFCAB14O75071 495 aa20.3■□□□□ 0.84
PKD1-238ENST00000570150 PDIA4P13667 645 aaKnown RBP20.3■□□□□ 0.84
PKD1-238ENST00000570150 PDXDC2PQ6P474 469 aa20.3■□□□□ 0.84
PKD1-238ENST00000570150 RPAINQ86UA6 219 aa20.3■□□□□ 0.84
PKD1-238ENST00000570150 BBXQ8WY36 941 aaPredicted RBP20.3■□□□□ 0.84
PKD1-238ENST00000570150 RNPEPQ9H4A4 650 aa20.3■□□□□ 0.84
PKD1-238ENST00000570150 DISC1Q9NRI5 854 aa20.3■□□□□ 0.84
PKD1-238ENST00000570150 NRBP2Q9NSY0 501 aa20.3■□□□□ 0.84
PKD1-238ENST00000570150 POTEB3A0JP26 581 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 BTBD18B2RXH4 712 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 CYP2C9P11712 490 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 CYP2C18P33260 490 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 ZNF484Q5JVG2 852 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 POTEBQ6S5H4 581 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 LRRC8DQ7L1W4 858 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 CKAP2LQ8IYA6 745 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 EXOC8Q8IYI6 725 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 ATP8B4Q8TF62 1192 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 BCAS3Q9H6U6 928 aa20.29■□□□□ 0.84
PKD1-238ENST00000570150 MAFBQ9Y5Q3 323 aaPredicted RBP20.29■□□□□ 0.84
PKD1-238ENST00000570150 H3BQV1 296 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 DDX39AO00148 427 aaKnown RBP20.28■□□□□ 0.84
PKD1-238ENST00000570150 PSMD10O75832 226 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 TDP2O95551 362 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 FGBP02675 491 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 IQCF3P0C7M6 154 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 CSF2RAP15509 400 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 ST3GAL1Q11201 340 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 GRIK4Q16099 956 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 NOSTRINQ8IVI9 506 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 NME8Q8N427 588 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 ETNPPLQ8TBG4 499 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 TNFRSF25Q93038 417 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 LRCH3Q96II8 777 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 RNPC3Q96LT9 517 aaKnown RBP20.28■□□□□ 0.84
PKD1-238ENST00000570150 KCNMB3Q9NPA1 279 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 TUBE1Q9UJT0 475 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 PPME1Q9Y570 386 aa20.28■□□□□ 0.84
PKD1-238ENST00000570150 MBLAC1A4D2B0 266 aaPredicted RBP20.27■□□□□ 0.84
PKD1-238ENST00000570150 M0QZ92 97 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 NEMFO60524 1076 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 BAIAP3O94812 1187 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 CCNE2O96020 404 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 CKBP12277 381 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 ITGB8P26012 769 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 NR5A1Q13285 461 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 PPP2R5CQ13362 524 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 SWSAP1Q6NVH7 229 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 MIER3Q7Z3K6 550 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 TRIM50Q86XT4 487 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 OXER1Q8TDS5 423 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 INTS4Q96HW7 963 aaKnown RBP20.27■□□□□ 0.84
PKD1-238ENST00000570150 SETD4Q9NVD3 440 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 STK24Q9Y6E0 443 aa20.27■□□□□ 0.84
PKD1-238ENST00000570150 ADAMTS3O15072 1205 aa20.26■□□□□ 0.83
PKD1-238ENST00000570150 MAGEB2O15479 319 aa20.26■□□□□ 0.83
PKD1-238ENST00000570150 THPOP40225 353 aa20.26■□□□□ 0.83
PKD1-238ENST00000570150 CCL23P55773 120 aa20.26■□□□□ 0.83
PKD1-238ENST00000570150 IER5Q5VY09 327 aa20.26■□□□□ 0.83
PKD1-238ENST00000570150 NEK9Q8TD19 979 aa20.26■□□□□ 0.83
PKD1-238ENST00000570150 RSPH10B2B2RC85 870 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 RSPH10BP0C881 870 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 INSRRP14616 1297 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 U2AF2P26368 475 aaKnown RBP eCLIP20.25■□□□□ 0.83
PKD1-238ENST00000570150 MARK3P27448 753 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 TMOD1P28289 359 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 ADAM17P78536 824 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 CDC42EP1Q00587 391 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 PLCB4Q15147 1175 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 CALCRLQ16602 461 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 ODR4Q5SWX8 454 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 USP38Q8NB14 1042 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 HERVK_113Q902F9 699 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 JPH2Q9BR39 696 aaPredicted RBP20.25■□□□□ 0.83
PKD1-238ENST00000570150 FTOQ9C0B1 505 aaKnown RBP eCLIP20.25■□□□□ 0.83
PKD1-238ENST00000570150 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 PCDHA12Q9UN75 941 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 PCDHA2Q9Y5H9 948 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 MYH7BA7E2Y1 1941 aa20.25■□□□□ 0.83
PKD1-238ENST00000570150 LAD1O00515 517 aa20.24■□□□□ 0.83
PKD1-238ENST00000570150 TREHO43280 583 aa20.24■□□□□ 0.83
PKD1-238ENST00000570150 GJB2P29033 226 aa20.24■□□□□ 0.83
PKD1-238ENST00000570150 SMAD3P84022 425 aaKnown RBP20.24■□□□□ 0.83
PKD1-238ENST00000570150 CUL4AQ13619 759 aa20.24■□□□□ 0.83
PKD1-238ENST00000570150 CCDC60Q8IWA6 550 aaPredicted RBP20.24■□□□□ 0.83
PKD1-238ENST00000570150 APBB2Q92870 758 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms