RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 CRNKL1Q9BZJ0 848 aaKnown RBP7.35□□□□□ -1.23
LINC00556-201ENST00000569603 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
LINC00556-201ENST00000569603 STAP2Q9UGK3 403 aa7.35□□□□□ -1.23
LINC00556-201ENST00000569603 DDX19BQ9UMR2 479 aa7.35□□□□□ -1.23
LINC00556-201ENST00000569603 NOVA2Q9UNW9 492 aaKnown RBP7.35□□□□□ -1.23
LINC00556-201ENST00000569603 PLXNA1Q9UIW2 1896 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 CYBAP13498 195 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 AKR1B1P15121 316 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 CD97P48960 835 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 ATP11AP98196 1134 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 RAB3GAP1Q15042 981 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 UBE3CQ15386 1083 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 ZYXQ15942 572 aaKnown RBP7.34□□□□□ -1.23
LINC00556-201ENST00000569603 OCLNQ16625 522 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 LRRC26Q2I0M4 334 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 C12orf60Q5U649 245 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 TXNDC11Q6PKC3 985 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 CAPN12Q6ZSI9 719 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 C16orf86Q6ZW13 317 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 CLASRPQ8N2M8 674 aaKnown RBP7.34□□□□□ -1.23
LINC00556-201ENST00000569603 SHCBP1Q8NEM2 672 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 REPS2Q8NFH8 660 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 NPLOC4Q8TAT6 608 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 DYNLL2Q96FJ2 89 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 YTHDC1Q96MU7 727 aaKnown RBP7.34□□□□□ -1.23
LINC00556-201ENST00000569603 PAGR1Q9BTK6 254 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 MOV10L1Q9BXT6 1211 aaKnown RBP7.34□□□□□ -1.23
LINC00556-201ENST00000569603 RBSNQ9H1K0 784 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 C11orf49Q9H6J7 331 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 RPAP3Q9H6T3 665 aaPredicted RBP7.34□□□□□ -1.23
LINC00556-201ENST00000569603 ARMT1Q9H993 441 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.23
LINC00556-201ENST00000569603 ATP8A2Q9NTI2 1148 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 PAG1Q9NWQ8 432 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 MCM9Q9NXL9 1143 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 ZMIZ1Q9ULJ6 1067 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 TMX2Q9Y320 296 aa7.34□□□□□ -1.23
LINC00556-201ENST00000569603 ROBO3Q96MS0 1386 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 MCM3APO60318 1980 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 CYP2D7A0A087X1C5 515 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 PAX4O43316 350 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 COBLO75128 1261 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 MBD4O95243 580 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 RFX1P22670 979 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 TXKP42681 527 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 MAGEA10P43363 369 aaPredicted RBP7.33□□□□□ -1.24
LINC00556-201ENST00000569603 CCNA1P78396 465 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 PDE3AQ14432 1141 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 COG2Q14746 738 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 SNX17Q15036 470 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 LRIT3Q3SXY7 679 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 OLFML2BQ68BL8 750 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 TMEM179Q6ZVK1 233 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 C7orf61Q8IZ16 206 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 OR13H1Q8NG92 308 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 LPAR1Q92633 364 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 FEZ1Q99689 392 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 MTA3Q9BTC8 594 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 SPATC1LQ9H0A9 340 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 PUS7LQ9H0K6 701 aaKnown RBP7.33□□□□□ -1.24
LINC00556-201ENST00000569603 BOLA2Q9H3K6 86 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 SWAP70Q9UH65 585 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 MYH4Q9Y623 1939 aa7.33□□□□□ -1.24
LINC00556-201ENST00000569603 IGKV6D-41A0A0C4DH26 115 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 LINC01387J3KSC0 135 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 TM4SF5O14894 197 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 STRNO43815 780 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 CREB3O43889 395 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 HMMRO75330 724 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 PPFIA4O75335 1185 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 EIF3JO75822 258 aaKnown RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 MED26O95402 600 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 POLR3DP05423 398 aaPredicted RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 IFIT2P09913 472 aaKnown RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 CALRP27797 417 aaKnown RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 ADORA2AP29274 412 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 CYP2C19P33261 490 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 CDK8P49336 464 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 C16orf46Q6P387 395 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 CTR9Q6PD62 1173 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 KRBA2Q6ZNG9 492 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 ABRAQ8N0Z2 381 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 MB21D1Q8N884 522 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 ATG4CQ96DT6 458 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 STRBPQ96SI9 672 aaKnown RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 MKNK1Q9BUB5 465 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 LACRTQ9GZZ8 138 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 DCTPP1Q9H773 170 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 VCPKMTQ9H867 229 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 CABP5Q9NP86 173 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 HOXC10Q9NYD6 342 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 DDX20Q9UHI6 824 aaKnown RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 RCAN3Q9UKA8 241 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 ZNF214Q9UL59 606 aaPredicted RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 ZMYND8Q9ULU4 1186 aaPredicted RBP7.32□□□□□ -1.24
LINC00556-201ENST00000569603 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
LINC00556-201ENST00000569603 GSG1L2A8MUP6 293 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms