RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 USP28Q96RU2 1077 aa18.21■□□□□ 0.51
LPCAT4-205ENST00000563748 HDAC6Q9UBN7 1215 aa18.21■□□□□ 0.51
LPCAT4-205ENST00000563748 SEC63Q9UGP8 760 aaKnown RBP18.21■□□□□ 0.51
LPCAT4-205ENST00000563748 PCDHA11Q9Y5I1 949 aa18.21■□□□□ 0.51
LPCAT4-205ENST00000563748 SORBS3O60504 671 aa18.2■□□□□ 0.5
LPCAT4-205ENST00000563748 NR1I2O75469 434 aa18.2■□□□□ 0.5
LPCAT4-205ENST00000563748 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
LPCAT4-205ENST00000563748 ICAM3P32942 547 aa18.2■□□□□ 0.5
LPCAT4-205ENST00000563748 RABGGTBP53611 331 aa18.2■□□□□ 0.5
LPCAT4-205ENST00000563748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.2■□□□□ 0.5
LPCAT4-205ENST00000563748 ALG1Q9BT22 464 aa18.2■□□□□ 0.5
LPCAT4-205ENST00000563748 MEIS2O14770 477 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 RXRAP19793 462 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 TRIM29Q14134 588 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 GNPTABQ3T906 1256 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 USP17L6PQ6QN14 398 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 CMTR1Q8N1G2 835 aaKnown RBP18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 LINC00301Q8NCQ3 95 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 MRPS27Q92552 414 aaKnown RBP18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 CUL5Q93034 780 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 C16orf70Q9BSU1 422 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 PRDM12Q9H4Q4 367 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 SLC28A3Q9HAS3 691 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 TRANK1O15050 2925 aa18.19■□□□□ 0.5
LPCAT4-205ENST00000563748 SPATA31C2B4DYI2 1134 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 MYOGP15173 224 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 SELPP16109 830 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 SEMA3FQ13275 785 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 PTK7Q13308 1070 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 GPNMBQ14956 572 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 STX1AQ16623 288 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 PCNX4Q63HM2 1172 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 XRRA1Q6P2D8 792 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 LRRC8DQ7L1W4 858 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 FANCBQ8NB91 859 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 ENGASEQ8NFI3 743 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 SLC9A7Q96T83 725 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 GAS2L1Q99501 681 aaPredicted RBP18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 BCAS3Q9H6U6 928 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 MLXIPQ9HAP2 919 aa18.18■□□□□ 0.5
LPCAT4-205ENST00000563748 GOLGA8AA7E2F4 631 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 BAIAP3O94812 1187 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 CKBP12277 381 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 IFNAR1P17181 557 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 ME1P48163 572 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 HIC1Q14526 733 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 STK38Q15208 465 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 SF3A1Q15459 793 aaKnown RBP18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 TRIM71Q2Q1W2 868 aaKnown RBP18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 TMTC3Q6ZXV5 915 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 RAB11FIP4Q86YS3 637 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 USP38Q8NB14 1042 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 PHOSPHO2Q8TCD6 241 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 DTNBO60941 627 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 NEDD9Q14511 834 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 PPP2R2DQ66LE6 453 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 TRAF7Q6Q0C0 670 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 METTL7BQ6UX53 244 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 TRIM22Q8IYM9 498 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 WNT8BQ93098 351 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 COL25A1Q9BXS0 654 aaPredicted RBP18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 ANO10Q9NW15 660 aa18.17■□□□□ 0.5
LPCAT4-205ENST00000563748 SPTLC2O15270 562 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 PPP6R2O75170 966 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 CXCL10P02778 98 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 LGALS2P05162 132 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 TPM2P07951 284 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 HOXC8P31273 242 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 ZNF200P98182 395 aaPredicted RBP18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 ADGRE1Q14246 886 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 CAMK4Q16566 473 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 ANO6Q4KMQ2 910 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 MICU3Q86XE3 530 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 TIGD1Q96MW7 591 aa18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 NAT10Q9H0A0 1025 aaKnown RBP18.16■□□□□ 0.5
LPCAT4-205ENST00000563748 hCG_1642624A0A1W2PR95 340 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 H3BRB1 525 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 NOP56O00567 594 aaKnown RBP18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 NBNO60934 754 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 U2AF2P26368 475 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■■■■ 28.8
LPCAT4-205ENST00000563748 CDC25BP30305 580 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 ZNF165P49910 485 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 SNW1Q13573 536 aaKnown RBP18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 NTRK3Q16288 839 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 SARM1Q6SZW1 724 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 CYFIP1Q7L576 1253 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 SERINC5Q86VE9 423 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 HERC6Q8IVU3 1022 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 FMR1NBQ8N0W7 255 aaPredicted RBP18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 FSIP1Q8NA03 581 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 GPR20Q99678 358 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 SENP7Q9BQF6 1050 aa18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 TUT1Q9H6E5 874 aaKnown RBP18.15■□□□□ 0.5
LPCAT4-205ENST00000563748 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms