RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 LMBR1Q8WVP7 490 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 INPP4AQ96PE3 977 aaPredicted RBP9.68□□□□□ -0.86
CKLF-208ENST00000563092 GPR20Q99678 358 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 AMNQ9BXJ7 453 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 RNF41Q9H4P4 317 aaPredicted RBP9.68□□□□□ -0.86
CKLF-208ENST00000563092 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 ZDBF2Q9HCK1 2354 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 CCDC171Q6TFL3 1326 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 SPATA31C2B4DYI2 1134 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 GLP2RO95838 553 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 CTSHP09668 335 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 GNAT1P11488 350 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 RRP1P56182 461 aaKnown RBP9.67□□□□□ -0.86
CKLF-208ENST00000563092 MRPS9P82933 396 aaKnown RBP9.67□□□□□ -0.86
CKLF-208ENST00000563092 SIGLEC14Q08ET2 396 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 LPIN1Q14693 890 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 SLC35G1Q2M3R5 365 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 METTL7BQ6UX53 244 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 SPPL3Q8TCT6 385 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 SUSD6Q92537 303 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
CKLF-208ENST00000563092 ZKSCAN3Q9BRR0 538 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 MLXIPQ9HAP2 919 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 SETD4Q9NVD3 440 aa9.67□□□□□ -0.86
CKLF-208ENST00000563092 MYH7BA7E2Y1 1941 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 NRCAMQ92823 1304 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 MBLAC1A4D2B0 266 aaPredicted RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 ZBTB5O15062 677 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 GFRA3O60609 400 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 STAM2O75886 525 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 ITGB1P05556 798 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 PARP1P09874 1014 aaKnown RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 MYCLP12524 364 aaPredicted RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 ATF7P17544 494 aaPredicted RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 CCND2P30279 289 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 PDE1AP54750 535 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 VCPP55072 806 aaKnown RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 NMIQ13287 307 aaPredicted RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 TAF2Q6P1X5 1199 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 ADGRD2Q7Z7M1 963 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 IQCA1Q86XH1 822 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 SUGP1Q8IWZ8 645 aaKnown RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 CMTR2Q8IYT2 770 aaKnown RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 STAG2Q8N3U4 1231 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 ATP8B4Q8TF62 1192 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 LINC01599Q8WXQ3 324 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 PHF7Q9BWX1 381 aaPredicted RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 IRF2BPLQ9H1B7 796 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 KAT14Q9H8E8 782 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 ZSWIM5Q9P217 1185 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 TELO2Q9Y4R8 837 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
CKLF-208ENST00000563092 TTC3P53804 2025 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 LAMA4Q16363 1823 aa9.66□□□□□ -0.86
CKLF-208ENST00000563092 SPTBN4Q9H254 2564 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
CKLF-208ENST00000563092 SORBS3O60504 671 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 KDM4AO75164 1064 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 GHRP10912 638 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 HOXA13P31271 388 aaPredicted RBP9.65□□□□□ -0.86
CKLF-208ENST00000563092 NDUFV1P49821 464 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 KCNC3Q14003 757 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 BTG3Q14201 252 aaPredicted RBP9.65□□□□□ -0.86
CKLF-208ENST00000563092 NEDD9Q14511 834 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 FBXO47Q5MNV8 452 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 MARCH8Q5T0T0 291 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 RUFY4Q6ZNE9 571 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 RTN4RL1Q86UN2 441 aaPredicted RBP9.65□□□□□ -0.86
CKLF-208ENST00000563092 TRIM50Q86XT4 487 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 SENP7Q9BQF6 1050 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 IGFLR1Q9H665 355 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 RIOX1Q9H6W3 641 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 MAD2L2Q9UI95 211 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 USP15Q9Y4E8 981 aaPredicted RBP9.65□□□□□ -0.86
CKLF-208ENST00000563092 PCDHA1Q9Y5I3 950 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 SQORQ9Y6N5 450 aa9.65□□□□□ -0.86
CKLF-208ENST00000563092 VPS13AQ96RL7 3174 aa9.65□□□□□ -0.87
CKLF-208ENST00000563092 PLXNA3P51805 1871 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 GCOM1H8Y6P7 765 aaPredicted RBP9.64□□□□□ -0.87
CKLF-208ENST00000563092 ZNF213O14771 459 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 FIBPO43427 364 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 POLR2MP0CAP2 368 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 AVPR2P30518 371 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 ARHGAP4P98171 946 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 SEC23AQ15436 765 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 GNPTABQ3T906 1256 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 TMEM184AQ6ZMB5 413 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 TSHZ1Q6ZSZ6 1077 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 KLHL23Q8NBE8 558 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 VN1R2Q8NFZ6 395 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 PPP2R3CQ969Q6 453 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 AGO3Q9H9G7 860 aaKnown RBP9.64□□□□□ -0.87
CKLF-208ENST00000563092 VAT1LQ9HCJ6 419 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 ZNF215Q9UL58 517 aaPredicted RBP9.64□□□□□ -0.87
CKLF-208ENST00000563092 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
CKLF-208ENST00000563092 CACNA1AO00555 2505 aa9.64□□□□□ -0.87
CKLF-208ENST00000563092 B4E1Z4 1266 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms