RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 SMARCC2Q8TAQ2 1214 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 KCNB2Q92953 911 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 LZTS2Q9BRK4 669 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 NKX2-4Q9H2Z4 354 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 RALGAPA2Q2PPJ7 1873 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 KLF18A0A0U1RQI7 1052 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 ZBBXA8MT70 800 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 ADAMTS3O15072 1205 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 ZBTB43O43298 467 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 ATP9AO75110 1047 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 LGALS2P05162 132 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 FOSL2P15408 326 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 HOXC8P31273 242 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 GGCXP38435 758 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 MBTPS1Q14703 1052 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 KCNV1Q6PIU1 500 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 CYFIP1Q7L576 1253 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 DHX32Q7L7V1 743 aaKnown RBP8.51□□□□□ -1.05
ZEB1-223ENST00000561304 HEATR3Q7Z4Q2 680 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 SCUBE3Q8IX30 993 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 MAFAQ8NHW3 353 aaPredicted RBP8.51□□□□□ -1.05
ZEB1-223ENST00000561304 CUL5Q93034 780 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 PGBD1Q96JS3 809 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 GPR20Q99678 358 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 KATNAL1Q9BW62 490 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
ZEB1-223ENST00000561304 OSBPL7Q9BZF2 842 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 SNX14Q9Y5W7 946 aa8.51□□□□□ -1.05
ZEB1-223ENST00000561304 TCF20Q9UGU0 1960 aaKnown RBP8.51□□□□□ -1.05
ZEB1-223ENST00000561304 NID2Q14112 1375 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 GOLGA8AA7E2F4 631 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 GOLGA8BA8MQT2 603 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 STXBP3O00186 592 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 FIBPO43427 364 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 NBNO60934 754 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 STAM2O75886 525 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 TGFB3P10600 412 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 CKBP12277 381 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 KCNA2P16389 499 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 ITGB5P18084 799 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 HSPA4P34932 840 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 SP4Q02446 784 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 RBL2Q08999 1139 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 APOBRQ0VD83 1088 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 BFSP2Q13515 415 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 RTN1Q16799 776 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 PUS10Q3MIT2 529 aaKnown RBP8.5□□□□□ -1.05
ZEB1-223ENST00000561304 GNPTABQ3T906 1256 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 ZNF618Q5T7W0 954 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 METTL7BQ6UX53 244 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 Q6ZUG5 572 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 LRRC8DQ7L1W4 858 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 SPRED2Q7Z698 418 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 TMCO2Q7Z6W1 182 aaPredicted RBP8.5□□□□□ -1.05
ZEB1-223ENST00000561304 RPUSD2Q8IZ73 545 aaKnown RBP8.5□□□□□ -1.05
ZEB1-223ENST00000561304 C7orf31Q8N865 590 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 CAGE1Q8TC20 777 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 AFAP1L1Q8TED9 768 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 JAKMIP1Q96N16 626 aaKnown RBP8.5□□□□□ -1.05
ZEB1-223ENST00000561304 PRDM12Q9H4Q4 367 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 PSTPIP2Q9H939 334 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 MLXIPQ9HAP2 919 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 NOD1Q9Y239 953 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 SLC4A7Q9Y6M7 1214 aa8.5□□□□□ -1.05
ZEB1-223ENST00000561304 H3BRB1 525 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PPFIA4O75335 1185 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 ADH1BP00325 375 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PFKMP08237 780 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 SMIM10L2AP0DMW4 78 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 SMIM10L2BP0DMW5 78 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 SELPP16109 830 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 ATP2A2P16615 1042 aaKnown RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 SSTR3P32745 418 aaPredicted RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 RFC2P35250 354 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 ADD1P35611 737 aaKnown RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 DEFB103AP81534 67 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 ADGRE1Q14246 886 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 KRT32Q14532 448 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 RAB30Q15771 203 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PPP1R18Q6NYC8 613 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 CYP2W1Q8TAV3 490 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 MTIF3Q9H2K0 278 aaKnown RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 TUT1Q9H6E5 874 aaKnown RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PRDM6Q9NQX0 595 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 RBM28Q9NW13 759 aaKnown RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 TMEM260Q9NX78 707 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PCDHA6Q9UN73 950 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PCDHA8Q9Y5H6 950 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 UBIAD1Q9Y5Z9 338 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 COL4A6Q14031 1691 aa8.49□□□□□ -1.05
ZEB1-223ENST00000561304 PRRC2BQ5JSZ5 2229 aaKnown RBP8.49□□□□□ -1.05
ZEB1-223ENST00000561304 GSTTP1A0A1W2PQM5 241 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 EPOPA6NHQ4 379 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 NOP56O00567 594 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms