RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 RNF146Q9NTX7 359 aa6.26□□□□□ -1.41
ZEB1-220ENST00000560909 SAGE1Q9NXZ1 904 aa6.26□□□□□ -1.41
ZEB1-220ENST00000560909 PCDHA6Q9UN73 950 aa6.26□□□□□ -1.41
ZEB1-220ENST00000560909 PCDHA8Q9Y5H6 950 aa6.26□□□□□ -1.41
ZEB1-220ENST00000560909 PARP14Q460N5 1801 aa6.26□□□□□ -1.41
ZEB1-220ENST00000560909 RPTORQ8N122 1335 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 THSD7BQ9C0I4 1608 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 CYP3A7-CYP3A51PA0A087WV96 503 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 H3BQV1 296 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 GCOM1H8Y6P7 765 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 PEX10O60683 326 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 F11P03951 625 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 CYP3A4P08684 503 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 HOXC6P09630 235 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 POLR2MP0CAP2 368 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 ALAS1P13196 640 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 ERCC3P19447 782 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 CYP3A7P24462 503 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 MAPK4P31152 587 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 KRT2P35908 639 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 SREBF1P36956 1147 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 TOB1P50616 345 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 USP11P51784 963 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 RPS6P62753 249 aaKnown RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 CCNA1P78396 465 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 GUCY1B3Q02153 619 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 CRHR2Q13324 411 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 ORC2Q13416 577 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 TRIM29Q14134 588 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 SAFBQ15424 915 aaKnown RBP eCLIP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 TAF1CQ15572 869 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 EARS2Q5JPH6 523 aaKnown RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 INTS6LQ5JSJ4 861 aaKnown RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 XRRA1Q6P2D8 792 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 MOXD1Q6UVY6 613 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 KRT25Q7Z3Z0 450 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 CPXCR1Q8N123 301 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 REXO1Q8N1G1 1221 aaKnown RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 FAM133AQ8N9E0 248 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 MORC4Q8TE76 937 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 USP6NLQ92738 828 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 PORCNQ9H237 461 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 ACAD9Q9H845 621 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 CYP39A1Q9NYL5 469 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 DIS3Q9Y2L1 958 aaKnown RBP6.25□□□□□ -1.41
ZEB1-220ENST00000560909 SMCHD1A6NHR9 2005 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 PFASO15067 1338 aa6.25□□□□□ -1.41
ZEB1-220ENST00000560909 SLC15A5A6NIM6 579 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 C8AP07357 584 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 ARAFP10398 606 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 EDNRBP24530 442 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 SSTR4P31391 388 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 NASPP49321 788 aaPredicted RBP6.24□□□□□ -1.41
ZEB1-220ENST00000560909 HTRA3P83110 453 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 BAATQ14032 418 aaPredicted RBP6.24□□□□□ -1.41
ZEB1-220ENST00000560909 GRB14Q14449 540 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 USH1GQ495M9 461 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 RILPL1Q5EBL4 403 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 PPP4R3AQ6IN85 833 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 USP17L6PQ6QN14 398 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 VSIG10LQ86VR7 867 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 ANKRD13CQ8N6S4 541 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 C4orf32Q8N8J7 132 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 JMYQ8N9B5 988 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 ARMC2Q8NEN0 867 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 DNERQ8NFT8 737 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 SMCR8Q8TEV9 937 aaPredicted RBP6.24□□□□□ -1.41
ZEB1-220ENST00000560909 FGD4Q96M96 766 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 KDM4CQ9H3R0 1056 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 BRMS1Q9HCU9 246 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 TMPRSS4Q9NRS4 437 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 RNF186Q9NXI6 227 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 COL20A1Q9P218 1284 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 GJD2Q9UKL4 321 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 ISY1Q9ULR0 285 aaKnown RBP6.24□□□□□ -1.41
ZEB1-220ENST00000560909 CTDP1Q9Y5B0 961 aaPredicted RBP6.24□□□□□ -1.41
ZEB1-220ENST00000560909 ASTN1O14525 1302 aa6.24□□□□□ -1.41
ZEB1-220ENST00000560909 VPS37CA5D8V6 355 aaPredicted RBP6.23□□□□□ -1.41
ZEB1-220ENST00000560909 CFAP99D6REC4 459 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 MEIS1O00470 390 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 FCER1AP12319 257 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 XRCC5P13010 732 aaKnown RBP6.23□□□□□ -1.41
ZEB1-220ENST00000560909 GCFC2P16383 781 aaKnown RBP6.23□□□□□ -1.41
ZEB1-220ENST00000560909 CTGFP29279 349 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 CTBSQ01459 385 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 MAP2K1Q02750 393 aaPredicted RBP6.23□□□□□ -1.41
ZEB1-220ENST00000560909 IRF5Q13568 498 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 NONOQ15233 471 aaKnown RBP eCLIP6.23□□□□□ -1.41
ZEB1-220ENST00000560909 PTPAQ15257 358 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 UBE2SQ16763 222 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 ZNF792Q3KQV3 632 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 MAMDC4Q6UXC1 1216 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 SLC30A10Q6XR72 485 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 RNF207Q6ZRF8 634 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 NIPA1Q7RTP0 329 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 FERMT3Q86UX7 667 aa6.23□□□□□ -1.41
ZEB1-220ENST00000560909 MSL3Q8N5Y2 521 aaKnown RBP6.23□□□□□ -1.41
ZEB1-220ENST00000560909 RASGRP4Q8TDF6 673 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms