RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 A0A1B0GUA9 196 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PSDA5PKW4 1024 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 F8VZ95 297 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 H0YIN7 160 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 hCG_1984214I3L0E3 225 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 RPN1P04843 607 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 OR52Z1P0C646 297 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 STAT6P42226 847 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PRCPP42785 496 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PMS1P54277 932 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 JAG1P78504 1218 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 EIF2B5Q13144 721 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ZNF658Q5TYW1 1059 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 SPECC1LQ69YQ0 1117 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 FAM117BQ6P1L5 589 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 TATDN1Q6P1N9 297 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 KCTD1Q719H9 257 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PEX5LQ8IYB4 626 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ZNF713Q8N859 430 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 HELQQ8TDG4 1101 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 AASDHPPTQ9NRN7 309 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 MAFFQ9ULX9 164 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 CTNND2Q9UQB3 1225 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ERLIN1O75477 346 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 TDP2O95551 362 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 MYL1P05976 194 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 PLCG1P19174 1290 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 SLC16A2P36021 539 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 CLCN2P51788 898 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 ADCY1Q08828 1119 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 SNX1Q13596 522 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 BRD3Q15059 726 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 C9orf131Q5VYM1 1079 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 CEP135Q66GS9 1140 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 KCNV1Q6PIU1 500 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 NANOGNBQ7Z5D8 188 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 IRF2BP1Q8IU81 584 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 PLIN2Q99541 437 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 PYM1Q9BRP8 204 aaKnown RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 TCHPQ9BT92 498 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 RPAP3Q9H6T3 665 aaPredicted RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 GPCPD1Q9NPB8 672 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 TBK1Q9UHD2 729 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 ATAD5Q96QE3 1844 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 USP17L10C9JJH3 530 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 INPP5BP32019 993 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 CLK1P49759 484 aaKnown RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 ADKP55263 362 aaKnown RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 INHBEP58166 350 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 AMPD3Q01432 767 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 SFSWAPQ12872 951 aaKnown RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 RRP1BQ14684 758 aaKnown RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 MAP7D1Q3KQU3 841 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 FAM76AQ8TAV0 307 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 GIPC2Q8TF65 315 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 MMADHCQ9H3L0 296 aaPredicted RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 SPC25Q9HBM1 224 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 ODF2LQ9ULJ1 636 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 RABGAP1Q9Y3P9 1069 aa5.59□□□□□ -1.51
TMEM260-210ENST00000556422 COL2A1P02458 1487 aaPredicted RBP5.59□□□□□ -1.51
TMEM260-210ENST00000556422 PNMA6FA0A0J9YX94 578 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 TRIM49BA6NDI0 452 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 LRRC10BA6NIK2 292 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 TBCAO75347 108 aaKnown RBP5.59□□□□□ -1.52
TMEM260-210ENST00000556422 RHOBTB3O94955 611 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 HLA-DOAP06340 250 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 EEF2P13639 858 aaKnown RBP5.59□□□□□ -1.52
TMEM260-210ENST00000556422 TECP42680 631 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 EN1Q05925 392 aaPredicted RBP5.59□□□□□ -1.52
TMEM260-210ENST00000556422 PTK7Q13308 1070 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 PTPN14Q15678 1187 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 UBE2SQ16763 222 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 KMT5BQ4FZB7 885 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 REXO1L1PQ8IX06 675 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 ADSSL1Q8N142 457 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 AK8Q96MA6 479 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 P2RX7Q99572 595 aaKnown RBP5.59□□□□□ -1.52
TMEM260-210ENST00000556422 TACO1Q9BSH4 297 aaKnown RBP5.59□□□□□ -1.52
TMEM260-210ENST00000556422 GINM1Q9NU53 330 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 RWDD2AQ9UIY3 292 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 MAPK8IP1Q9UQF2 711 aa5.59□□□□□ -1.52
TMEM260-210ENST00000556422 ZBTB5O15062 677 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 FOSP01100 380 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 TXLNAP40222 546 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 UBA7P41226 1012 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 MRPL28Q13084 256 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 PAK1Q13153 545 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 KCNB1Q14721 858 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 KRT31Q15323 416 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 LRRC23Q53EV4 343 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 GPATCH4Q5T3I0 446 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 RRAGBQ5VZM2 374 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 TRIM65Q6PJ69 517 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 SND1Q7KZF4 910 aaKnown RBP eCLIP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NT5DC4Q86YG4 428 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 LARGE2Q8N3Y3 721 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 GIMAP8Q8ND71 665 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 POM121Q96HA1 1249 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 SPACA7Q96KW9 195 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 SPATA17Q96L03 361 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms