RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 HOXB8P17481 243 aaPredicted RBP9.82□□□□□ -0.84
TROAP-208ENST00000548817 AOC1P19801 751 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 UBE3AQ05086 875 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 TRDNQ13061 729 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 ANGPT1Q15389 498 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 CHD1LQ86WJ1 897 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 KIAA2013Q8IYS2 634 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 CMTR2Q8IYT2 770 aaKnown RBP9.82□□□□□ -0.84
TROAP-208ENST00000548817 SAMD3Q8N6K7 520 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 ENAHQ8N8S7 591 aaPredicted RBP9.82□□□□□ -0.84
TROAP-208ENST00000548817 RUBCNQ92622 972 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 RTP3Q9BQQ7 232 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 DSCC1Q9BVC3 393 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 JMJD4Q9H9V9 463 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 PXMP2Q9NR77 195 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 MAP3K20Q9NYL2 800 aaKnown RBP9.82□□□□□ -0.84
TROAP-208ENST00000548817 ERICH2A1L162 156 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 C17orf102A2RUQ5 167 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 DGKIO75912 1065 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 ZNF286BP0CG31 522 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 DNAJB1P25685 340 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 ZNF200P98182 395 aaPredicted RBP9.81□□□□□ -0.84
TROAP-208ENST00000548817 PDE12Q6L8Q7 609 aaKnown RBP9.81□□□□□ -0.84
TROAP-208ENST00000548817 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 RASGRP4Q8TDF6 673 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 POF1BQ8WVV4 589 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 ATP6V0A1Q93050 837 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 NECTIN4Q96NY8 510 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 MLXIPQ9HAP2 919 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 ZSWIM5Q9P217 1185 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 PCDHA1Q9Y5I3 950 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 KIAA1671Q9BY89 1806 aa9.81□□□□□ -0.84
TROAP-208ENST00000548817 FASNP49327 2511 aaKnown RBP9.8□□□□□ -0.84
TROAP-208ENST00000548817 MYO10Q9HD67 2058 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 KLRF2D3W0D1 207 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 GCOM1H8Y6P7 765 aaPredicted RBP9.8□□□□□ -0.84
TROAP-208ENST00000548817 POLR2MP0CAP2 368 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 TGFB3P10600 412 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 GNAT1P11488 350 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 CCND2P30279 289 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 HIC1Q14526 733 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 DUSP6Q16828 381 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 KIAA0319Q5VV43 1072 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 ZC3H14Q6PJT7 736 aaKnown RBP9.8□□□□□ -0.84
TROAP-208ENST00000548817 RBM23Q86U06 439 aaKnown RBP9.8□□□□□ -0.84
TROAP-208ENST00000548817 SMC5Q8IY18 1101 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 DTWD2Q8NBA8 298 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 KLHL23Q8NBE8 558 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 SPATA33Q96N06 139 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 S1PR5Q9H228 398 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 OSBPL3Q9H4L5 887 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 COL20A1Q9P218 1284 aa9.8□□□□□ -0.84
TROAP-208ENST00000548817 MRPL42Q9Y6G3 142 aaKnown RBP9.8□□□□□ -0.84
TROAP-208ENST00000548817 NOP56O00567 594 aaKnown RBP9.79□□□□□ -0.84
TROAP-208ENST00000548817 ZBTB5O15062 677 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 SORBS3O60504 671 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 CSPG5O95196 566 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 GGPS1O95749 300 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 CTSHP09668 335 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 HSD17B4P51659 736 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 NUCB1Q02818 461 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 KCNC3Q14003 757 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 SART3Q15020 963 aaKnown RBP9.79□□□□□ -0.84
TROAP-208ENST00000548817 GNPTABQ3T906 1256 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 CELF3Q5SZQ8 465 aaKnown RBP9.79□□□□□ -0.84
TROAP-208ENST00000548817 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 CWF19L1Q69YN2 538 aaKnown RBP9.79□□□□□ -0.84
TROAP-208ENST00000548817 ANKRD54Q6NXT1 300 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 STOX1Q6ZVD7 989 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 VSIG10LQ86VR7 867 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 HOMER1Q86YM7 354 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 ZDHHC14Q8IZN3 488 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 GPR161Q8N6U8 529 aaKnown RBP9.79□□□□□ -0.84
TROAP-208ENST00000548817 VN1R2Q8NFZ6 395 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 CYP2W1Q8TAV3 490 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 RUFY2Q8WXA3 655 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 BORCS6Q96GS4 357 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 PDCD2LQ9BRP1 358 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 LAMA4Q16363 1823 aa9.79□□□□□ -0.84
TROAP-208ENST00000548817 FANCMQ8IYD8 2048 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 ENPP3O14638 875 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 IFIT3O14879 490 aaKnown RBP9.78□□□□□ -0.84
TROAP-208ENST00000548817 TREHO43280 583 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 HOXA13P31271 388 aaPredicted RBP9.78□□□□□ -0.84
TROAP-208ENST00000548817 PGM5Q15124 567 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 RSPO4Q2I0M5 234 aaPredicted RBP9.78□□□□□ -0.84
TROAP-208ENST00000548817 FAM43BQ6ZT52 329 aaPredicted RBP9.78□□□□□ -0.84
TROAP-208ENST00000548817 RALYLQ86SE5 291 aaKnown RBP9.78□□□□□ -0.84
TROAP-208ENST00000548817 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 STAG2Q8N3U4 1231 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 FLCNQ8NFG4 579 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 MICAL1Q8TDZ2 1067 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 HINFPQ9BQA5 517 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 C16orf70Q9BSU1 422 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 OSBPL7Q9BZF2 842 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 EHMT1Q9H9B1 1298 aa9.78□□□□□ -0.84
TROAP-208ENST00000548817 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
TROAP-208ENST00000548817 PLXNA4Q9HCM2 1894 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms