RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 BACE1P56817 501 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 OS9Q13438 667 aaPredicted RBP7.86□□□□□ -1.15
LRCH3-216ENST00000481048 KIAA0319Q5VV43 1072 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 OGFOD3Q6PK18 319 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 PI16Q6UXB8 463 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 FTSJ3Q8IY81 847 aaKnown RBP7.86□□□□□ -1.15
LRCH3-216ENST00000481048 TMEM57Q8N5G2 664 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 SHISA4Q96DD7 197 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 EHD4Q9H223 541 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 ZNF576Q9H609 170 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 SLC5A6Q9Y289 635 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 SIPA1L1O43166 1804 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 MAST2Q6P0Q8 1798 aa7.86□□□□□ -1.15
LRCH3-216ENST00000481048 H0YGN5 161 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 TFRCP02786 760 aaKnown RBP7.85□□□□□ -1.15
LRCH3-216ENST00000481048 HLA-DOAP06340 250 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 NEFLP07196 543 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 C8AP07357 584 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 HMGCS2P54868 508 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 HSP90AB4PQ58FF6 505 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 TREML2Q5T2D2 321 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 ERC1Q8IUD2 1116 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 SH3RF3Q8TEJ3 882 aaPredicted RBP7.85□□□□□ -1.15
LRCH3-216ENST00000481048 TGFBRAP1Q8WUH2 860 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 BCL7CQ8WUZ0 217 aaPredicted RBP7.85□□□□□ -1.15
LRCH3-216ENST00000481048 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
LRCH3-216ENST00000481048 AATFQ9NY61 560 aaKnown RBP eCLIP7.85□□□□□ -1.15
LRCH3-216ENST00000481048 TMOD4Q9NZQ9 345 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 MORF4L1Q9UBU8 362 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 GJD2Q9UKL4 321 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 PPP1R9AQ9ULJ8 1098 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 PLXNB2O15031 1838 aa7.85□□□□□ -1.15
LRCH3-216ENST00000481048 RPTORQ8N122 1335 aa7.84□□□□□ -1.15
LRCH3-216ENST00000481048 MYH8P13535 1937 aa7.84□□□□□ -1.15
LRCH3-216ENST00000481048 ZNFX1Q9P2E3 1918 aaKnown RBP7.84□□□□□ -1.15
LRCH3-216ENST00000481048 A0A1W2PPC1 479 aa7.84□□□□□ -1.15
LRCH3-216ENST00000481048 ICMTO60725 284 aa7.84□□□□□ -1.15
LRCH3-216ENST00000481048 FARP2O94887 1054 aaPredicted RBP7.84□□□□□ -1.15
LRCH3-216ENST00000481048 HMGCRP04035 888 aa7.84□□□□□ -1.15
LRCH3-216ENST00000481048 XRCC5P13010 732 aaKnown RBP7.84□□□□□ -1.15
LRCH3-216ENST00000481048 ITPKAP23677 461 aa7.84□□□□□ -1.15
LRCH3-216ENST00000481048 IRX3P78415 501 aaPredicted RBP7.84□□□□□ -1.15
LRCH3-216ENST00000481048 PLCL1Q15111 1095 aa7.84□□□□□ -1.15
LRCH3-216ENST00000481048 ZNF574Q6ZN55 896 aaPredicted RBP7.84□□□□□ -1.15
LRCH3-216ENST00000481048 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
LRCH3-216ENST00000481048 ALPK3Q96L96 1907 aa7.84□□□□□ -1.16
LRCH3-216ENST00000481048 FLT1P17948 1338 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 MAPK4P31152 587 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 JAG1P78504 1218 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 MAP3K12Q12852 859 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 RRP1BQ14684 758 aaKnown RBP7.83□□□□□ -1.16
LRCH3-216ENST00000481048 TTF1Q15361 905 aaPredicted RBP7.83□□□□□ -1.16
LRCH3-216ENST00000481048 CYP27C1Q4G0S4 372 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 TATDN1Q6P1N9 297 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 NECAB2Q7Z6G3 386 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 TTC6Q86TZ1 520 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 MAPKAPK5Q8IW41 473 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 ITPRIPQ8IWB1 547 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 GPRC5AQ8NFJ5 357 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 SOCS4Q8WXH5 440 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 DEFB118Q96PH6 123 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 NPHS2Q9NP85 383 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 DBNLQ9UJU6 430 aaKnown RBP7.83□□□□□ -1.16
LRCH3-216ENST00000481048 PALD1Q9ULE6 856 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 TNNQ9UQP3 1299 aa7.83□□□□□ -1.16
LRCH3-216ENST00000481048 SMCHD1A6NHR9 2005 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 H3BRB1 525 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 CYP7A1P22680 504 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 USP14P54578 494 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 HERVK_113P62684 666 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 AP3B2Q13367 1082 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 ORC1Q13415 861 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 SPRED2Q7Z698 418 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 ADGRA1Q86SQ6 560 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 CCDC84Q86UT8 332 aaPredicted RBP7.82□□□□□ -1.16
LRCH3-216ENST00000481048 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 EAF2Q96CJ1 260 aaPredicted RBP7.82□□□□□ -1.16
LRCH3-216ENST00000481048 P2RX7Q99572 595 aaKnown RBP7.82□□□□□ -1.16
LRCH3-216ENST00000481048 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.82□□□□□ -1.16
LRCH3-216ENST00000481048 PRO3102Q9H379 93 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 TUT1Q9H6E5 874 aaKnown RBP7.82□□□□□ -1.16
LRCH3-216ENST00000481048 DNAJC18Q9H819 358 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.82□□□□□ -1.16
LRCH3-216ENST00000481048 EGFL7Q9UHF1 273 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 SERPINB13Q9UIV8 391 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 ZBTB21Q9ULJ3 1066 aa7.82□□□□□ -1.16
LRCH3-216ENST00000481048 SYNGAP1Q96PV0 1343 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 RANBP2P49792 3224 aaKnown RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 CPNE3O75131 537 aaKnown RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 IDH1O75874 414 aaKnown RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 GLRX3O76003 335 aaKnown RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 PAPLNO95428 1278 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 LIG1P18858 919 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 CCNA1P78396 465 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 HNRNPUQ00839 825 aaKnown RBP eCLIP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 BNIP3Q12983 259 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 ZNF792Q3KQV3 632 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 LCE1DQ5T752 114 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms