RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PDCP20941 246 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 MCTP1Q6DN14 999 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 MFSD5Q6N075 450 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 RETREG2Q8NC44 543 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 CAGE1Q8TC20 777 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 AFAP1L1Q8TED9 768 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 PCYT2Q99447 389 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 RNPEPQ9H4A4 650 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 KCNMB3Q9NPA1 279 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 DISC1Q9NRI5 854 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 TRPC6Q9Y210 931 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 NEMFO60524 1076 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 ATP2B1P20020 1258 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 U2AF2P26368 475 aaKnown RBP eCLIP23.11■■□□□ 1.29
VARS-224ENST00000479051 TRAPPC10P48553 1259 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 FPGSQ05932 587 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 PPFIA1Q13136 1202 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 PTK7Q13308 1070 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 SWSAP1Q6NVH7 229 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 PDXDC2PQ6P474 469 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 MIER3Q7Z3K6 550 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 POTEDQ86YR6 584 aa23.11■■□□□ 1.29
VARS-224ENST00000479051 PITPNM1O00562 1244 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 ITGB8P26012 769 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 HOXC8P31273 242 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 CYP2C18P33260 490 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 ORC2Q13416 577 aaPredicted RBP23.1■■□□□ 1.29
VARS-224ENST00000479051 PPIGQ13427 754 aaKnown RBP eCLIP23.1■■□□□ 1.292e-6■■□□□ 14.1
VARS-224ENST00000479051 CALCRLQ16602 461 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 CCDC60Q8IWA6 550 aaPredicted RBP23.1■■□□□ 1.29
VARS-224ENST00000479051 CKAP2LQ8IYA6 745 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 GJA10Q969M2 543 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 UNC45AQ9H3U1 944 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 SETD4Q9NVD3 440 aa23.1■■□□□ 1.29
VARS-224ENST00000479051 COLQQ9Y215 455 aaPredicted RBP23.1■■□□□ 1.29
VARS-224ENST00000479051 POTEB3A0JP26 581 aa23.09■■□□□ 1.29
VARS-224ENST00000479051 RRN3P2A6NIE6 340 aa23.09■■□□□ 1.29
VARS-224ENST00000479051 GRIK4Q16099 956 aa23.09■■□□□ 1.29
VARS-224ENST00000479051 POTEBQ6S5H4 581 aa23.09■■□□□ 1.29
VARS-224ENST00000479051 A0A1W2PPC1 479 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 KIF28PB7ZC32 967 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 HBP1O60381 514 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
VARS-224ENST00000479051 MCM7P33993 719 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 CCL23P55773 120 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 ZNF200P98182 395 aaPredicted RBP23.08■■□□□ 1.29
VARS-224ENST00000479051 PPP2R5CQ13362 524 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 PLCB4Q15147 1175 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 TTC38Q5R3I4 469 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 SERINC5Q86VE9 423 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 ATP8B4Q8TF62 1192 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 LMBR1Q8WVP7 490 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 FAM167AQ96KS9 214 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 PCDH10Q9P2E7 1040 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 GABBR1Q9UBS5 961 aa23.08■■□□□ 1.29
VARS-224ENST00000479051 MAFBQ9Y5Q3 323 aaPredicted RBP23.08■■□□□ 1.29
VARS-224ENST00000479051 HAS1Q92839 578 aa23.07■■□□□ 1.28
VARS-224ENST00000479051 PRO3102Q9H379 93 aa23.07■■□□□ 1.28
VARS-224ENST00000479051 TUBE1Q9UJT0 475 aa23.07■■□□□ 1.28
VARS-224ENST00000479051 KAT6AQ92794 2004 aa23.07■■□□□ 1.28
VARS-224ENST00000479051 UMODL1Q5DID0 1318 aa23.07■■□□□ 1.28
VARS-224ENST00000479051 IGSF9BQ9UPX0 1349 aa23.07■■□□□ 1.28
VARS-224ENST00000479051 TREHO43280 583 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 INSRRP14616 1297 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 RFC2P35250 354 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 IGBP1P78318 339 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 RBL2Q08999 1139 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 HIC1Q14526 733 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 TAF2Q6P1X5 1199 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 B3GNT9Q6UX72 402 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 BBXQ8WY36 941 aaPredicted RBP23.06■■□□□ 1.28
VARS-224ENST00000479051 CTAGE1Q96RT6 745 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 VAV3Q9UKW4 847 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 PCDHA12Q9UN75 941 aa23.06■■□□□ 1.28
VARS-224ENST00000479051 COL1A2P08123 1366 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 DKC1O60832 514 aaKnown RBP eCLIP23.05■■□□□ 1.28
VARS-224ENST00000479051 CAND2O75155 1236 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 PARNO95453 639 aaKnown RBP23.05■■□□□ 1.28
VARS-224ENST00000479051 RPLP2P05387 115 aaKnown RBP23.05■■□□□ 1.28
VARS-224ENST00000479051 CSF2RAP15509 400 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 SELPP16109 830 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 ZNF174Q15697 407 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 RSPH3Q86UC2 560 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 RPUSD2Q8IZ73 545 aaKnown RBP23.05■■□□□ 1.28
VARS-224ENST00000479051 TDHQ8IZJ6 230 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 DHX38Q92620 1227 aaKnown RBP23.05■■□□□ 1.28
VARS-224ENST00000479051 WNT8AQ9H1J5 351 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 NRBP2Q9NSY0 501 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 CEP131Q9UPN4 1083 aa23.05■■□□□ 1.28
VARS-224ENST00000479051 MYH9P35579 1960 aaKnown RBP23.04■■□□□ 1.28
VARS-224ENST00000479051 VPS37CA5D8V6 355 aaPredicted RBP23.04■■□□□ 1.28
VARS-224ENST00000479051 WNT7AO00755 349 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 IQCF3P0C7M6 154 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 CKBP12277 381 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 THPOP40225 353 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 ADAM17P78536 824 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 RILPL1Q5EBL4 403 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 ZNF484Q5JVG2 852 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 NCAPH2Q6IBW4 605 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 PSRC1Q6PGN9 363 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms