RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 SAMD3Q8N6K7 520 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
PGK1-203ENST00000476531 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 MAD2L2Q9UI95 211 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 MICAL3Q7RTP6 2002 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.05□□□□□ -0.48
PGK1-203ENST00000476531 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
PGK1-203ENST00000476531 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 H3BNC9 293 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 TREHO43280 583 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 LGALS2P05162 132 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 SMIM10L2AP0DMW4 78 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 SMIM10L2BP0DMW5 78 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 TGFB3P10600 412 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 COL19A1Q14993 1142 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 FOXD4L5Q5VV16 416 aaPredicted RBP12.05□□□□□ -0.48
PGK1-203ENST00000476531 TMTC3Q6ZXV5 915 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 SRBD1Q8N5C6 995 aaKnown RBP12.05□□□□□ -0.48
PGK1-203ENST00000476531 FOXD4L4Q8WXT5 416 aaPredicted RBP12.05□□□□□ -0.48
PGK1-203ENST00000476531 SEPT8Q92599 483 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 ATP6V0A1Q93050 837 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 TOP1MTQ969P6 601 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 SAMD11Q96NU1 681 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 MLXIPQ9HAP2 919 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 ZDHHC9Q9Y397 364 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.05□□□□□ -0.48
PGK1-203ENST00000476531 PCDHA1Q9Y5I3 950 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 CNTNAP5Q8WYK1 1306 aa12.05□□□□□ -0.48
PGK1-203ENST00000476531 MYH7BA7E2Y1 1941 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 BAZ2BQ9UIF8 2168 aaKnown RBP12.04□□□□□ -0.48
PGK1-203ENST00000476531 MUC6Q6W4X9 2439 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 H3BQ06 376 aaPredicted RBP12.04□□□□□ -0.48
PGK1-203ENST00000476531 H3BRB1 525 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 CAND2O75155 1236 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 CCND2P30279 289 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
PGK1-203ENST00000476531 RCAN1P53805 252 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 GPM6BQ13491 265 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 PTPROQ16827 1216 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
PGK1-203ENST00000476531 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 TCEAL5Q5H9L2 206 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 TMEM192Q8IY95 271 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 YME1L1Q96TA2 773 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
PGK1-203ENST00000476531 SLC26A6Q9BXS9 759 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 RNPEPQ9H4A4 650 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 TUT1Q9H6E5 874 aaKnown RBP12.04□□□□□ -0.48
PGK1-203ENST00000476531 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 FRMPD4Q14CM0 1322 aa12.04□□□□□ -0.48
PGK1-203ENST00000476531 MYH6P13533 1939 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 GCOM1H8Y6P7 765 aaPredicted RBP12.03□□□□□ -0.48
PGK1-203ENST00000476531 CPLX1O14810 134 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 CYTH3O43739 400 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 UPP2O95045 317 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 CTSHP09668 335 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 POLR2MP0CAP2 368 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 CALM1P0DP23 149 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 CALM2P0DP24 149 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 CALM3P0DP25 149 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 IFNAR1P17181 557 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 ICAM3P32942 547 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 MRE11P49959 708 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 MRPS9P82933 396 aaKnown RBP12.03□□□□□ -0.48
PGK1-203ENST00000476531 SEMA3FQ13275 785 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 BANK1Q8NDB2 785 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 CTCFLQ8NI51 663 aaPredicted RBP12.03□□□□□ -0.48
PGK1-203ENST00000476531 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
PGK1-203ENST00000476531 CHAMP1Q96JM3 812 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 PIGSQ96S52 555 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 RIOX1Q9H6W3 641 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
PGK1-203ENST00000476531 TELO2Q9Y4R8 837 aa12.03□□□□□ -0.48
PGK1-203ENST00000476531 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 SPATA31C2B4DYI2 1134 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 LINC00271P0C7V0 271 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 ALADP13716 330 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 SYT1P21579 422 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 ADAM17P78536 824 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 GUCY1B3Q02153 619 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 ZP2Q05996 745 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 METTL7BQ6UX53 244 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 FCHSD1Q86WN1 690 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 TRIM50Q86XT4 487 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 HOMER1Q86YM7 354 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 SNX27Q96L92 541 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
PGK1-203ENST00000476531 GPR20Q99678 358 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 NSUN3Q9H649 340 aaKnown RBP12.02□□□□□ -0.49
PGK1-203ENST00000476531 SETD4Q9NVD3 440 aa12.02□□□□□ -0.49
PGK1-203ENST00000476531 RBM28Q9NW13 759 aaKnown RBP12.02□□□□□ -0.49
PGK1-203ENST00000476531 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 DCXO43602 365 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 LTBRP36941 435 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 SSRP1Q08945 709 aaKnown RBP12.01□□□□□ -0.49
PGK1-203ENST00000476531 PKN1Q16512 942 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms