RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 RC3H2Q9HBD1 1191 aaKnown RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 PLA2G2EQ9NZK7 142 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 GVINP1Q7Z2Y8 2422 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 ADGRA3Q8IWK6 1321 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 MYH7BA7E2Y1 1941 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 B4E1Z4 1266 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 GRM6O15303 877 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 LINC01565O15544 149 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 DHX16O60231 1041 aaKnown RBP5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 KDM4AO75164 1064 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 MMP1P03956 469 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 RB1P06400 928 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 PARP1P09874 1014 aaKnown RBP5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 MYCLP12524 364 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 CCND2P30279 289 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 HOXA13P31271 388 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 GTF2F1P35269 517 aaKnown RBP eCLIP5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 BMPR1AP36894 532 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 NT5C2P49902 561 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 PDE1AP54750 535 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 ADAM17P78536 824 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 PGM5Q15124 567 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 TMEM132AQ24JP5 1023 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 CCDC178Q5BJE1 867 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 FAM26DQ5JW98 314 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 BMP8AQ7Z5Y6 402 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 TRIM50Q86XT4 487 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 STAG2Q8N3U4 1231 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 FIBCD1Q8N539 461 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 EDAQ92838 391 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 MTMR8Q96EF0 704 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 IL17RAQ96F46 866 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 MSLNLQ96KJ4 702 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 ZSCAN10Q96SZ4 725 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 AMNQ9BXJ7 453 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 ADAM33Q9BZ11 813 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 BCAS3Q9H6U6 928 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 MLXIPQ9HAP2 919 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 VAT1LQ9HCJ6 419 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 SETD4Q9NVD3 440 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 MAP3K20Q9NYL2 800 aaKnown RBP5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 RWDD3Q9Y3V2 267 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 LAMA4Q16363 1823 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 ZFHX4Q86UP3 3567 aa5.96□□□□□ -1.46
SNRNP40-204ENST00000474025 MYH6P13533 1939 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 TMEM221A6NGB7 291 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 M0R296 226 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 STXBP3O00186 592 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 NOP56O00567 594 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 ZNF213O14771 459 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 ZBTB5O15062 677 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 CSPG5O95196 566 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 EYA4O95677 639 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 CHRNA1P02708 482 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 GHRP10912 638 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 GNAT1P11488 350 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 MRPS9P82933 396 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 TCF15Q12870 199 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 SEMA3FQ13275 785 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 ADAM15Q13444 863 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 CAMK1Q14012 370 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 SLC35G1Q2M3R5 365 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 ANKRD45Q5TZF3 282 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 METTL7BQ6UX53 244 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 TRIM67Q6ZTA4 783 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 SUGP1Q8IWZ8 645 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 SAMD3Q8N6K7 520 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 SMRP1Q8NCR6 262 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 LMBR1Q8WVP7 490 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 LINC01599Q8WXQ3 324 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 ZNF689Q96CS4 500 aaPredicted RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 KCTD12Q96CX2 325 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 INPP4AQ96PE3 977 aaPredicted RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 GPR20Q99678 358 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 PLVAPQ9BX97 442 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 USP26Q9BXU7 913 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 EHMT1Q9H9B1 1298 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 ALG13Q9NP73 1137 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 ZSWIM5Q9P217 1185 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 CD207Q9UJ71 328 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 TELO2Q9Y4R8 837 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 SUPT16HQ9Y5B9 1047 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 PCDHGA10Q9Y5H3 936 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 PCDHA1Q9Y5I3 950 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 FAM186AA6NE01 2351 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 FRMPD4Q14CM0 1322 aa5.95□□□□□ -1.46
SNRNP40-204ENST00000474025 TTC3P53804 2025 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 CFAP47Q6ZTR5 3102 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 TRIM6-TRIM34B2RNG4 842 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 SPATA31C2B4DYI2 1134 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 LOC730098B7Z3J9 87 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 KLRF2D3W0D1 207 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 GCOM1H8Y6P7 765 aaPredicted RBP5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 GFRA3O60609 400 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 DGKIO75912 1065 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 GLP2RO95838 553 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 POLR2MP0CAP2 368 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 DNAJB1P25685 340 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 ICAM3P32942 547 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 NDUFV1P49821 464 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms