RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 ICAM3P32942 547 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 MGAT3Q09327 533 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 MCMDC2Q4G0Z9 681 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 UTP14CQ5TAP6 766 aaKnown RBP13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CYFIP1Q7L576 1253 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 POF1BQ8WVV4 589 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 GPR20Q99678 358 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 RNF41Q9H4P4 317 aaPredicted RBP13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 KIAA1671Q9BY89 1806 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 MYO15AQ9UKN7 3530 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 MYH6P13533 1939 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 SGSM2O43147 1006 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CDC45O75419 566 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 SP4Q02446 784 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 SEMA3FQ13275 785 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 NMIQ13287 307 aaPredicted RBP13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PTPN21Q16825 1174 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 FBXO47Q5MNV8 452 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 FCHSD1Q86WN1 690 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CMTR2Q8IYT2 770 aaKnown RBP13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ENAHQ8N8S7 591 aaPredicted RBP13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 VN1R2Q8NFZ6 395 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 SUSD6Q92537 303 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ZNF215Q9UL58 517 aaPredicted RBP13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PCDHA1Q9Y5I3 950 aa13.03□□□□□ -0.32
PRAMEF35P-201ENST00000458709 TTC3P53804 2025 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PRR23AA6NEV1 266 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 B4E1Z4 1266 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PROB1E7EW31 1015 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PER2O15055 1255 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SP100P23497 879 aaPredicted RBP13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 GATMP50440 423 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MRPS9P82933 396 aaKnown RBP13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CRIPAKQ8N1N5 446 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MTMR8Q96EF0 704 aa13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 INPP4AQ96PE3 977 aaPredicted RBP13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ZSCAN10Q96SZ4 725 aaPredicted RBP13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ZBTB5O15062 677 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ATF7P17544 494 aaPredicted RBP13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CD52P31358 61 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NEDD9Q14511 834 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TAF2Q6P1X5 1199 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 RTN4RL1Q86UN2 441 aaPredicted RBP13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 DNAJB3Q8WWF6 145 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ZBTB10Q96DT7 871 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TLE6Q9H808 572 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 RTEL1Q9NZ71 1219 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 DOCK5Q9H7D0 1870 aa13.01□□□□□ -0.33
PRAMEF35P-201ENST00000458709 DCHS1Q96JQ0 3298 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 FRMPD4Q14CM0 1322 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SPATA31C2B4DYI2 1134 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 KLRF2D3W0D1 207 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 GCOM1H8Y6P7 765 aaPredicted RBP13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 POLR2MP0CAP2 368 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MFAP1P55081 439 aaKnown RBP13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PPFIA1Q13136 1202 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 GNPTABQ3T906 1256 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CCDC178Q5BJE1 867 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ZBTB33Q86T24 672 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 HOMER1Q86YM7 354 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 RILPL2Q969X0 211 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 RIPOR3Q96MK2 946 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TUBE1Q9UJT0 475 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TRPC6Q9Y210 931 aa13□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PLXNA4Q9HCM2 1894 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SPTBN4Q9H254 2564 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PTPRZ1P23471 2315 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ZNF213O14771 459 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 FIBPO43427 364 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MARK3P27448 753 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NBL1P41271 181 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NT5C2P49902 561 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 GRIK4Q16099 956 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 DUSP6Q16828 381 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 RSPH3Q86UC2 560 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SAMD3Q8N6K7 520 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TMEM105Q8N8V8 129 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ESYT1Q9BSJ8 1104 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms