RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C17orf102A2RUQ5 167 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 DTNBO60941 627 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 ATG7O95352 703 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 PBX2P40425 430 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 TRAF7Q6Q0C0 670 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 LRRC8DQ7L1W4 858 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 CCDC83Q8IWF9 413 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 MBOAT7Q96N66 472 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 SMARCAD1Q9H4L7 1026 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 GJB4Q9NTQ9 266 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 ERAP1Q9NZ08 941 aa19.67■□□□□ 0.74
USP39-208ENST00000455732 MYH9P35579 1960 aaKnown RBP19.66■□□□□ 0.74
USP39-208ENST00000455732 CHD7Q9P2D1 2997 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 PARNO95453 639 aaKnown RBP19.66■□□□□ 0.74
USP39-208ENST00000455732 CCNE2O96020 404 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 ADAM17P78536 824 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 Q4G0T1 1027 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 ATP6V0A1Q93050 837 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 PCYT2Q99447 389 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 SLC4A7Q9Y6M7 1214 aa19.66■□□□□ 0.74
USP39-208ENST00000455732 MICAL3Q7RTP6 2002 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 IGKV6D-21A0A0A0MT36 114 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 CCDC194A0A1B0GVG4 234 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 TREHO43280 583 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 NBNO60934 754 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 GNAT1P11488 350 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 HMGN5P82970 282 aaKnown RBP19.65■□□□□ 0.74
USP39-208ENST00000455732 ZNF618Q5T7W0 954 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 ZNF746Q6NUN9 644 aaPredicted RBP19.65■□□□□ 0.74
USP39-208ENST00000455732 PLPPR4Q7Z2D5 763 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 OXER1Q8TDS5 423 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 GLG1Q92896 1179 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 TNFRSF25Q93038 417 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 TIFAQ96CG3 184 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 CDX2Q99626 313 aaPredicted RBP19.65■□□□□ 0.74
USP39-208ENST00000455732 BACH2Q9BYV9 841 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 AZI2Q9H6S1 392 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 NRCAMQ92823 1304 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 SIP14410 1827 aa19.65■□□□□ 0.74
USP39-208ENST00000455732 ZBBXA8MT70 800 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 MSH4O15457 936 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 CXCL10P02778 98 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 MMP1P03956 469 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 ACTN1P12814 892 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 KRT2P35908 639 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 SLC26A2P50443 739 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 KRT76Q01546 638 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 INF2Q27J81 1249 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 ABHD15Q6UXT9 468 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 SMAP1Q8IYB5 467 aaPredicted RBP19.64■□□□□ 0.73
USP39-208ENST00000455732 SLC5A5Q92911 643 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 RIT2Q99578 217 aa19.64■□□□□ 0.73
USP39-208ENST00000455732 FTOQ9C0B1 505 aaKnown RBP eCLIP19.64■□□□□ 0.73
USP39-208ENST00000455732 DDX39AO00148 427 aaKnown RBP19.63■□□□□ 0.73
USP39-208ENST00000455732 TDP2O95551 362 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 TRIM29Q14134 588 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 MBTPS1Q14703 1052 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 KRT40Q6A162 431 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 PPP4R3AQ6IN85 833 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 NEK8Q86SG6 692 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP39-208ENST00000455732 LMBR1Q8WVP7 490 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 ZNF576Q9H609 170 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 TCEAL9Q9UHQ7 104 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 LOXHD1Q8IVV2 1947 aa19.63■□□□□ 0.73
USP39-208ENST00000455732 CAND2O75155 1236 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 BAIAP3O94812 1187 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 GCFC2P16383 781 aaKnown RBP19.62■□□□□ 0.73
USP39-208ENST00000455732 ATP2A2P16615 1042 aaKnown RBP19.62■□□□□ 0.73
USP39-208ENST00000455732 MARK3P27448 753 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 THPOP40225 353 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 MCM2P49736 904 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 STAT5BP51692 787 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 PPFIA1Q13136 1202 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 NR5A1Q13285 461 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 RAB30Q15771 203 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 MIS18BP1Q6P0N0 1132 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 PIK3AP1Q6ZUJ8 805 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 ETNPPLQ8TBG4 499 aa19.62■□□□□ 0.73
USP39-208ENST00000455732 TNPO1Q92973 898 aaKnown RBP19.62■□□□□ 0.73
USP39-208ENST00000455732 NAP1L4Q99733 375 aaKnown RBP19.62■□□□□ 0.73
USP39-208ENST00000455732 YBX2Q9Y2T7 364 aaKnown RBP19.62■□□□□ 0.73
USP39-208ENST00000455732 RBAK-RBAKDNI3L0D1 243 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 RABGGTBP53611 331 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 GRIN2CQ14957 1233 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 LETM2Q2VYF4 491 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 FAM160B1Q5W0V3 765 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 DIS3L2Q8IYB7 885 aaKnown RBP19.61■□□□□ 0.73
USP39-208ENST00000455732 SLC9A7Q96T83 725 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 DDX25Q9UHL0 483 aaKnown RBP19.61■□□□□ 0.73
USP39-208ENST00000455732 MSRAQ9UJ68 235 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 TRANK1O15050 2925 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 EVPLQ92817 2033 aa19.61■□□□□ 0.73
USP39-208ENST00000455732 PRUNE2Q8WUY3 3088 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 MBLAC1A4D2B0 266 aaPredicted RBP19.6■□□□□ 0.73
USP39-208ENST00000455732 WDR64B1ANS9 1081 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 RSPH10B2B2RC85 870 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 GAS7O60861 476 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms