RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FERMT3Q86UX7 667 aa28.79■■■□□ 2.2
U2AF1-203ENST00000398137 WNT8BQ93098 351 aa28.79■■■□□ 2.2
U2AF1-203ENST00000398137 LENG9Q96B70 501 aa28.79■■■□□ 2.2
U2AF1-203ENST00000398137 UIMC1Q96RL1 719 aa28.79■■■□□ 2.2
U2AF1-203ENST00000398137 MTMR6Q9Y217 621 aa28.79■■■□□ 2.2
U2AF1-203ENST00000398137 WNT7AO00755 349 aa28.78■■■□□ 2.2
U2AF1-203ENST00000398137 STX6O43752 255 aa28.78■■■□□ 2.2
U2AF1-203ENST00000398137 PFKMP08237 780 aa28.78■■■□□ 2.2
U2AF1-203ENST00000398137 ATP2B1P20020 1258 aa28.78■■■□□ 2.2
U2AF1-203ENST00000398137 ZNF200P98182 395 aaPredicted RBP28.78■■■□□ 2.2
U2AF1-203ENST00000398137 MOXD1Q6UVY6 613 aa28.78■■■□□ 2.2
U2AF1-203ENST00000398137 DDX25Q9UHL0 483 aaKnown RBP28.78■■■□□ 2.2
U2AF1-203ENST00000398137 PTPRSQ13332 1948 aa28.78■■■□□ 2.2
U2AF1-203ENST00000398137 CHD7Q9P2D1 2997 aa28.78■■■□□ 2.2
U2AF1-203ENST00000398137 CYP3A7-CYP3A51PA0A087WV96 503 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 SLC37A4O43826 429 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 CCNT1O60563 726 aaKnown RBP28.77■■■□□ 2.2
U2AF1-203ENST00000398137 ATP9AO75110 1047 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 GCFC2P16383 781 aaKnown RBP28.77■■■□□ 2.2
U2AF1-203ENST00000398137 KCNA2P16389 499 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 CYP3A7P24462 503 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 RBL2Q08999 1139 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 BFSP2Q13515 415 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 MBOAT7Q96N66 472 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 KATNAL1Q9BW62 490 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 AGO4Q9HCK5 861 aaKnown RBP28.77■■■□□ 2.2
U2AF1-203ENST00000398137 NOD1Q9Y239 953 aa28.77■■■□□ 2.2
U2AF1-203ENST00000398137 RFC2P35250 354 aa28.76■■■□□ 2.19
U2AF1-203ENST00000398137 RABGGTBP53611 331 aa28.76■■■□□ 2.19
U2AF1-203ENST00000398137 TRIM71Q2Q1W2 868 aaKnown RBP28.76■■■□□ 2.19
U2AF1-203ENST00000398137 TRAF7Q6Q0C0 670 aa28.76■■■□□ 2.19
U2AF1-203ENST00000398137 C7orf31Q8N865 590 aa28.76■■■□□ 2.19
U2AF1-203ENST00000398137 NAP1L4Q99733 375 aaKnown RBP28.76■■■□□ 2.19
U2AF1-203ENST00000398137 MTIF3Q9H2K0 278 aaKnown RBP28.76■■■□□ 2.19
U2AF1-203ENST00000398137 MLXIPQ9HAP2 919 aa28.76■■■□□ 2.19
U2AF1-203ENST00000398137 NOL7Q9UMY1 257 aaKnown RBP28.76■■■□□ 2.19
U2AF1-203ENST00000398137 MAFGO15525 162 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 NEDD9Q14511 834 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 Q4G0T1 1027 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 PPP4R3AQ6IN85 833 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 RETREG2Q8NC44 543 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 MAFAQ8NHW3 353 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-203ENST00000398137 CAGE1Q8TC20 777 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 SENP7Q9BQF6 1050 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 NKX2-4Q9H2Z4 354 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 SLC4A7Q9Y6M7 1214 aa28.75■■■□□ 2.19
U2AF1-203ENST00000398137 MYOGP15173 224 aa28.74■■■□□ 2.19
U2AF1-203ENST00000398137 FOSL2P15408 326 aa28.74■■■□□ 2.19
U2AF1-203ENST00000398137 RESTQ13127 1097 aa28.74■■■□□ 2.19
U2AF1-203ENST00000398137 ITGB3BPQ13352 177 aaPredicted RBP28.74■■■□□ 2.19
U2AF1-203ENST00000398137 METTL7BQ6UX53 244 aa28.74■■■□□ 2.19
U2AF1-203ENST00000398137 CYFIP1Q7L576 1253 aa28.74■■■□□ 2.19
U2AF1-203ENST00000398137 AFAP1L1Q8TED9 768 aa28.74■■■□□ 2.19
U2AF1-203ENST00000398137 ZNF577Q9BSK1 485 aa28.74■■■□□ 2.19
U2AF1-203ENST00000398137 RBM19Q9Y4C8 960 aaKnown RBP28.74■■■□□ 2.19
U2AF1-203ENST00000398137 MSH4O15457 936 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 LGALS2P05162 132 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 CKBP12277 381 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 HOXC8P31273 242 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 SP4Q02446 784 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 NBR1Q14596 966 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 RAB30Q15771 203 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 TCTN1Q2MV58 587 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 TTC38Q5R3I4 469 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 GPR20Q99678 358 aa28.73■■■□□ 2.19
U2AF1-203ENST00000398137 MYO9BQ13459 2157 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 ZBBXA8MT70 800 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 IPO5O00410 1097 aaKnown RBP28.72■■■□□ 2.19
U2AF1-203ENST00000398137 SELPP16109 830 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 MCM7P33993 719 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 TRAPPC10P48553 1259 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 PKP1Q13835 747 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 FOXD4L5Q5VV16 416 aaPredicted RBP28.72■■■□□ 2.19
U2AF1-203ENST00000398137 BRAPQ7Z569 592 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 POTEDQ86YR6 584 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 GIMAP8Q8ND71 665 aaPredicted RBP28.72■■■□□ 2.19
U2AF1-203ENST00000398137 FOXD4L4Q8WXT5 416 aaPredicted RBP28.72■■■□□ 2.19
U2AF1-203ENST00000398137 GJA10Q969M2 543 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 SDF4Q9BRK5 362 aa28.72■■■□□ 2.19
U2AF1-203ENST00000398137 H3BRB1 525 aa28.71■■■□□ 2.19
U2AF1-203ENST00000398137 DDX39AO00148 427 aaKnown RBP28.71■■■□□ 2.19
U2AF1-203ENST00000398137 NBNO60934 754 aa28.71■■■□□ 2.19
U2AF1-203ENST00000398137 ATP2A2P16615 1042 aaKnown RBP28.71■■■□□ 2.19
U2AF1-203ENST00000398137 TOB1P50616 345 aaPredicted RBP28.71■■■□□ 2.19
U2AF1-203ENST00000398137 PTK7Q13308 1070 aa28.71■■■□□ 2.19
U2AF1-203ENST00000398137 LRRC8DQ7L1W4 858 aa28.71■■■□□ 2.19
U2AF1-203ENST00000398137 ETNPPLQ8TBG4 499 aa28.71■■■□□ 2.19
U2AF1-203ENST00000398137 TUT1Q9H6E5 874 aaKnown RBP28.71■■■□□ 2.19
U2AF1-203ENST00000398137 DAXXQ9UER7 740 aaPredicted RBP28.71■■■□□ 2.19
U2AF1-203ENST00000398137 MSRAQ9UJ68 235 aa28.71■■■□□ 2.19
U2AF1-203ENST00000398137 NFASCO94856 1347 aa28.7■■■□□ 2.19
U2AF1-203ENST00000398137 NEMFO60524 1076 aa28.7■■■□□ 2.18
U2AF1-203ENST00000398137 MBTPS1Q14703 1052 aa28.7■■■□□ 2.18
U2AF1-203ENST00000398137 ZNF174Q15697 407 aa28.7■■■□□ 2.18
U2AF1-203ENST00000398137 TRIM50Q86XT4 487 aa28.7■■■□□ 2.18
U2AF1-203ENST00000398137 CCDC155Q8N6L0 562 aa28.7■■■□□ 2.18
U2AF1-203ENST00000398137 PRDM12Q9H4Q4 367 aa28.7■■■□□ 2.18
U2AF1-203ENST00000398137 JPH1Q9HDC5 661 aaPredicted RBP28.7■■■□□ 2.18
U2AF1-203ENST00000398137 CXCL10P02778 98 aa28.69■■■□□ 2.18
U2AF1-203ENST00000398137 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms