RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TYRO3Q06418 890 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 GNL2Q13823 731 aaKnown RBP9.35□□□□□ -0.91
CD44-205ENST00000352818 SEPT2Q15019 361 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 PTPAQ15257 358 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 PTPROQ16827 1216 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 RSPO4Q2I0M5 234 aaPredicted RBP9.35□□□□□ -0.91
CD44-205ENST00000352818 RCSD1Q6JBY9 416 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 FAM117BQ6P1L5 589 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 C16orf86Q6ZW13 317 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 SIAH1Q8IUQ4 282 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 NOSTRINQ8IVI9 506 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 FMR1NBQ8N0W7 255 aaPredicted RBP9.35□□□□□ -0.91
CD44-205ENST00000352818 FSIP1Q8NA03 581 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
CD44-205ENST00000352818 TRIM44Q96DX7 344 aaPredicted RBP9.35□□□□□ -0.91
CD44-205ENST00000352818 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.35□□□□□ -0.91
CD44-205ENST00000352818 FBXO28Q9NVF7 368 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 CLIC4Q9Y696 253 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 MRVI1Q9Y6F6 885 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 MYH8P13535 1937 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
CD44-205ENST00000352818 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 KINO60870 393 aaKnown RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 PRDM1O75626 825 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 POLR3DP05423 398 aaPredicted RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 CMA1P23946 247 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 KIF5BP33176 963 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 NOVP48745 357 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 AKAP17AQ02040 695 aaKnown RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 CEBPZQ03701 1054 aaKnown RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 GPM6BQ13491 265 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 SF3A1Q15459 793 aaKnown RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 PTPN21Q16825 1174 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 ABCB5Q2M3G0 1257 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 RILPL1Q5EBL4 403 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 AXDND1Q5T1B0 1012 aaPredicted RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 ZNF467Q7Z7K2 595 aaPredicted RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 DCLK2Q8N568 766 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 RNF214Q8ND24 703 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
CD44-205ENST00000352818 TIGD1Q96MW7 591 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 CTAGE1Q96RT6 745 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 SEZ6LQ9BYH1 1024 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 ABHD16BQ9H3Z7 469 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 CLEC1BQ9P126 229 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 CD207Q9UJ71 328 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 RIPK3Q9Y572 518 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 BPTFQ12830 3046 aa9.34□□□□□ -0.91
CD44-205ENST00000352818 CUTAO60888 179 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 BMP15O95972 392 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 SMPD1P17405 629 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 RASA1P20936 1047 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 STAT3P40763 770 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 GNAQP50148 359 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 HTRA4P83105 476 aaPredicted RBP9.33□□□□□ -0.92
CD44-205ENST00000352818 EVX2Q03828 476 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 GRM4Q14833 912 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 SASS6Q6UVJ0 657 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 ARMCX2Q7L311 632 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 TLK2Q86UE8 772 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
CD44-205ENST00000352818 ELOA2Q8IYF1 753 aaPredicted RBP9.33□□□□□ -0.92
CD44-205ENST00000352818 SPICE1Q8N0Z3 855 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 STK11IPQ8N1F8 1099 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 SMRP1Q8NCR6 262 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 KAT14Q9H8E8 782 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 SH3GLB2Q9NR46 395 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 CEP131Q9UPN4 1083 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 HPSEQ9Y251 543 aa9.33□□□□□ -0.92
CD44-205ENST00000352818 ESPNB1AK53 854 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 VWA5AO00534 786 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 DYNC1LI2O43237 492 aaPredicted RBP9.32□□□□□ -0.92
CD44-205ENST00000352818 NBNO60934 754 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 PLEKHA8P1O95397 391 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 LMNAP02545 664 aaKnown RBP9.32□□□□□ -0.92
CD44-205ENST00000352818 CXCL10P02778 98 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 SUPT20HL2P0C7V6 817 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 KRT2P35908 639 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 ATXN1P54253 815 aaKnown RBP9.32□□□□□ -0.92
CD44-205ENST00000352818 TFAP4Q01664 338 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 TNFAIP2Q03169 654 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 ADAM15Q13444 863 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 CAMK4Q16566 473 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 STX1AQ16623 288 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 PFKFB3Q16875 520 aaPredicted RBP9.32□□□□□ -0.92
CD44-205ENST00000352818 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
CD44-205ENST00000352818 RESP18Q5W5W9 173 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.32□□□□□ -0.92
CD44-205ENST00000352818 CLEC10AQ8IUN9 316 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 CKAP2LQ8IYA6 745 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 ZNF579Q8NAF0 562 aaKnown RBP9.32□□□□□ -0.92
CD44-205ENST00000352818 NEDD1Q8NHV4 660 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 TNFRSF25Q93038 417 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms