RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MYCP01106 439 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 AFPP02771 609 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 TXNP10599 105 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 TATDN1Q6P1N9 297 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 RNF169Q8NCN4 708 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 OPTNQ96CV9 577 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 TSGA10Q9BZW7 698 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 NDST4Q9H3R1 872 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 FAM184BQ9ULE4 1060 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 ZNF541Q9H0D2 1346 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 A0A1W2PRG0 241 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 GOLGA8IPA6NC78 632 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 ASB14A6NK59 587 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 GOLGA8JA6NMD2 632 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 SLC25A27O95847 323 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 PTPRAP18433 802 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 PDCL2Q8N4E4 241 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 BPIFA3Q9BQP9 254 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 ATP6V0A4Q9HBG4 840 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 MYMKA6NI61 221 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 SLC16A4O15374 487 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 N4BP1O75113 896 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 GGPS1O95749 300 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 PPP2R3AQ06190 1150 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 DHX40Q8IX18 779 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 TUBE1Q9UJT0 475 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 PYCARDQ9ULZ3 195 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 SREBF1P36956 1147 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 EXOC8Q8IYI6 725 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 GPRC5AQ8NFJ5 357 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 PARK7Q99497 189 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 IFIH1Q9BYX4 1025 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 PRM3Q9NNZ6 103 aa15.85■□□□□ 0.13
PDLIM2-201ENST00000265810 USP50Q70EL3 339 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 CENPHQ9H3R5 247 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 TBC1D12O60347 775 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 YWHABP31946 246 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 KCNB1Q14721 858 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 SH3BP5LQ7L8J4 393 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 GUF1Q8N442 669 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 CDCA5Q96FF9 252 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 SELENOOQ9BVL4 669 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 FAM49AQ9H0Q0 323 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 COL1A1P02452 1464 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 SLU7O95391 586 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 TMEM191BP0C7N4 346 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 HOXA7P31268 230 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 CKAP4Q07065 602 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 ANKRD13CQ8N6S4 541 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 NLRP7Q8WX94 980 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 RIT2Q99578 217 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 PLVAPQ9BX97 442 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 NWD2Q9ULI1 1742 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 TNPO2O14787 897 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 MYL7Q01449 175 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 SARM1Q6SZW1 724 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 ZBTB33Q86T24 672 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 NKX2-3Q8TAU0 364 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 FAM167AQ96KS9 214 aa15.84■□□□□ 0.13
PDLIM2-201ENST00000265810 RPA1P27694 616 aa15.83■□□□□ 0.13
PDLIM2-201ENST00000265810 STK4Q13043 487 aa15.83■□□□□ 0.13
PDLIM2-201ENST00000265810 HLTFQ14527 1009 aaKnown RBP eCLIP15.83■□□□□ 0.13
PDLIM2-201ENST00000265810 ARHGEF6Q15052 776 aa15.83■□□□□ 0.13
PDLIM2-201ENST00000265810 C1orf112Q9NSG2 853 aa15.83■□□□□ 0.13
PDLIM2-201ENST00000265810 MKRN1Q9UHC7 482 aaKnown RBP15.83■□□□□ 0.13
PDLIM2-201ENST00000265810 OSTNP61366 133 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 ALCAMQ13740 583 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 VGLL4Q14135 290 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 CATSPER3Q86XQ3 398 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 C7orf25Q9BPX7 421 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 PFASO15067 1338 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 VWA5AO00534 786 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 ARP10275 920 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 DSG3P32926 999 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 CDR1P51861 262 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 KNOP1Q1ED39 458 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 SECISBP2LQ93073 1101 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 ZNF668Q96K58 619 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 APOL6Q9BWW8 343 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 HPSEQ9Y251 543 aa15.83■□□□□ 0.12
PDLIM2-201ENST00000265810 HIP1RO75146 1068 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 STAT5BP51692 787 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 EPN1Q9Y6I3 576 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 ASTN2O75129 1339 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 TNNC2P02585 160 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 CA8P35219 290 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 GTF2A2P52657 109 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 FMR1Q06787 632 aaKnown RBP eCLIP15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 MSANTD4Q8NCY6 345 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 CYP2W1Q8TAV3 490 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 U2AF1L4Q8WU68 220 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 NR3C1P04150 777 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 IQCB1Q15051 598 aa15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 SYTL5Q8TDW5 730 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-201ENST00000265810 PPP2R2CQ9Y2T4 447 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms