RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 RBAK-RBAKDNI3L0D1 243 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 TREHO43280 583 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 KRT76Q01546 638 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 PTK7Q13308 1070 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 SHHQ15465 462 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 TRAF7Q6Q0C0 670 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 PLPPR4Q7Z2D5 763 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 TMEM199Q8N511 208 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 AFAP1L1Q8TED9 768 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 CCNT1O60563 726 aaKnown RBP16.1■□□□□ 0.17
CNN1-201ENST00000252456 GCFC2P16383 781 aaKnown RBP16.1■□□□□ 0.17
CNN1-201ENST00000252456 FXR1P51114 621 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNN1-201ENST00000252456 STAT5BP51692 787 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 PLCB4Q15147 1175 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 LRCH2Q5VUJ6 765 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 SMAP1Q8IYB5 467 aaPredicted RBP16.1■□□□□ 0.17
CNN1-201ENST00000252456 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 ATP6V0A1Q93050 837 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNN1-201ENST00000252456 UNC45AQ9H3U1 944 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 AZI2Q9H6S1 392 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
CNN1-201ENST00000252456 KIF28PB7ZC32 967 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
CNN1-201ENST00000252456 GAS7O60861 476 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 IQCF3P0C7M6 154 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 ACRP10323 421 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 CKBP12277 381 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 ATP4AP20648 1035 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 PPFIA1Q13136 1202 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 PPIGQ13427 754 aaKnown RBP eCLIP16.09■□□□□ 0.17
CNN1-201ENST00000252456 BFSP2Q13515 415 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 CUL4AQ13619 759 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 GPNMBQ14956 572 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 MARCH8Q5T0T0 291 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 HAS1Q92839 578 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 IL23AQ9NPF7 189 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 PCDHA10Q9Y5I2 948 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 MAFBQ9Y5Q3 323 aaPredicted RBP16.09■□□□□ 0.17
CNN1-201ENST00000252456 IGSF9BQ9UPX0 1349 aa16.09■□□□□ 0.17
CNN1-201ENST00000252456 INSRRP14616 1297 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 GRIK4Q16099 956 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 LRIT3Q3SXY7 679 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 SWSAP1Q6NVH7 229 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 MIS18BP1Q6P0N0 1132 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 FOXP1Q9H334 677 aaPredicted RBP16.08■□□□□ 0.17
CNN1-201ENST00000252456 ZNF302Q9NR11 478 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 DISC1Q9NRI5 854 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 VAV3Q9UKW4 847 aa16.08■□□□□ 0.17
CNN1-201ENST00000252456 MBLAC1A4D2B0 266 aaPredicted RBP16.08■□□□□ 0.16
CNN1-201ENST00000252456 WDR64B1ANS9 1081 aa16.08■□□□□ 0.16
CNN1-201ENST00000252456 BACH1O14867 736 aa16.08■□□□□ 0.16
CNN1-201ENST00000252456 CHMP2AO43633 222 aa16.08■□□□□ 0.16
CNN1-201ENST00000252456 GJB2P29033 226 aa16.08■□□□□ 0.16
CNN1-201ENST00000252456 SLC26A2P50443 739 aa16.08■□□□□ 0.16
CNN1-201ENST00000252456 MBTPS1Q14703 1052 aa16.08■□□□□ 0.16
CNN1-201ENST00000252456 SAFBQ15424 915 aaKnown RBP eCLIP16.08■□□□□ 0.16
CNN1-201ENST00000252456 ZBTB10Q96DT7 871 aa16.08■□□□□ 0.16
CNN1-201ENST00000252456 ZBTB42B2RXF5 422 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 TBX3O15119 743 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 ZNF862O60290 1169 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 PSAPP07602 524 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 GNAT1P11488 350 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 SELPP16109 830 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNN1-201ENST00000252456 UGCGQ16739 394 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 ZNF618Q5T7W0 954 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 RASIP1Q5U651 963 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 FAM160B1Q5W0V3 765 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 PDXDC2PQ6P474 469 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 RUFY4Q6ZNE9 571 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 ZNF365Q70YC5 407 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 LRRC8DQ7L1W4 858 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 CCDC155Q8N6L0 562 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 ATP8B4Q8TF62 1192 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 TRAPPC12Q8WVT3 735 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 FAM20AQ96MK3 541 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
CNN1-201ENST00000252456 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 TRPC6Q9Y210 931 aa16.07■□□□□ 0.16
CNN1-201ENST00000252456 CDH23Q9H251 3354 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 CHD9Q3L8U1 2897 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 SFNP31947 248 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 JAK3P52333 1124 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 SPIRE1Q08AE8 756 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 PPP2R5CQ13362 524 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 PSRC1Q6PGN9 363 aaPredicted RBP16.06■□□□□ 0.16
CNN1-201ENST00000252456 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 NOSTRINQ8IVI9 506 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 RETREG2Q8NC44 543 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 GABBR1Q9UBS5 961 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 EVPLQ92817 2033 aa16.06■□□□□ 0.16
CNN1-201ENST00000252456 PTPRSQ13332 1948 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms