RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeast

Gene SME1, Length 285 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SME1	YOR159C	RRD2	Q12461	358 aa		3.15	□□□□□ -1.91
SME1	YOR159C	RPI1	P23250	407 aa	Known RBP	3.14	□□□□□ -1.91
SME1	YOR159C	PPH22	P23595	377 aa		3.14	□□□□□ -1.91
SME1	YOR159C	SPS22	P25380	463 aa		3.14	□□□□□ -1.91
SME1	YOR159C	SMY1	P32364	656 aa	Known RBP	3.14	□□□□□ -1.91
SME1	YOR159C	STB6	P36085	766 aa		3.14	□□□□□ -1.91
SME1	YOR159C	RIB5	P38145	238 aa		3.14	□□□□□ -1.91
SME1	YOR159C	SMF1	P38925	575 aa		3.14	□□□□□ -1.91
SME1	YOR159C	NDE1	P40215	560 aa		3.14	□□□□□ -1.91
SME1	YOR159C	NCA3	P46955	337 aa		3.14	□□□□□ -1.91
SME1	YOR159C	ECM27	P47144	725 aa		3.14	□□□□□ -1.91
SME1	YOR159C	SDT1	P53078	280 aa		3.14	□□□□□ -1.91
SME1	YOR159C	MNP1	P53163	194 aa	Predicted RBP	3.14	□□□□□ -1.91
SME1	YOR159C	GRX6	Q12438	231 aa		3.14	□□□□□ -1.91
SME1	YOR159C	TRA1	P38811	3744 aa		3.13	□□□□□ -1.91
SME1	YOR159C	YIM1	P28625	365 aa		3.13	□□□□□ -1.91
SME1	YOR159C	PRP21	P32524	280 aa	Predicted RBP	3.13	□□□□□ -1.91
SME1	YOR159C	ECM25	P32525	599 aa		3.13	□□□□□ -1.91
SME1	YOR159C	VHC1	P38329	1120 aa		3.13	□□□□□ -1.91
SME1	YOR159C	MST28	P39552	234 aa		3.13	□□□□□ -1.91
SME1	YOR159C	YIF1	P53845	314 aa	Known RBP	3.13	□□□□□ -1.91
SME1	YOR159C	VTA1	Q06263	330 aa		3.13	□□□□□ -1.91
SME1	YOR159C	TIM18	Q08749	192 aa		3.13	□□□□□ -1.91
SME1	YOR159C	TMS1	Q12116	473 aa		3.13	□□□□□ -1.91
SME1	YOR159C	HIS4	P00815	799 aa	Known RBP	3.12	□□□□□ -1.91
SME1	YOR159C	GPH1	P06738	902 aa	Known RBP	3.12	□□□□□ -1.91
SME1	YOR159C	ROX1	P25042	368 aa		3.12	□□□□□ -1.91
SME1	YOR159C	TIP1	P27654	210 aa	Predicted RBP	3.12	□□□□□ -1.91
SME1	YOR159C	RRT2	P38332	387 aa		3.12	□□□□□ -1.91
SME1	YOR159C	CCT2	P39076	527 aa	Known RBP	3.12	□□□□□ -1.91
SME1	YOR159C	ESL1	P40456	1118 aa		3.12	□□□□□ -1.91
SME1	YOR159C	PRM5	P40476	318 aa		3.12	□□□□□ -1.91
SME1	YOR159C	VMA13	P41807	478 aa	Known RBP	3.12	□□□□□ -1.91
SME1	YOR159C	KTR5	P53966	522 aa	Predicted RBP	3.12	□□□□□ -1.91
SME1	YOR159C	RRG7	Q08774	242 aa	Predicted RBP	3.12	□□□□□ -1.91
SME1	YOR159C	YPR022C	Q12139	1133 aa		3.12	□□□□□ -1.91
SME1	YOR159C	RAD61	Q99359	647 aa		3.12	□□□□□ -1.91
SME1	YOR159C	UBR2	Q07963	1872 aa		3.11	□□□□□ -1.91
SME1	YOR159C	YLR419W	Q06698	1435 aa	Known RBP	3.11	□□□□□ -1.91
SME1	YOR159C	RED1	P14291	827 aa		3.11	□□□□□ -1.91
SME1	YOR159C	PET123	P17558	318 aa		3.11	□□□□□ -1.91
SME1	YOR159C	HXT3	P32466	567 aa	Known RBP	3.11	□□□□□ -1.91
SME1	YOR159C	RPN12	P32496	274 aa		3.11	□□□□□ -1.91
SME1	YOR159C	HCS1	P34243	683 aa		3.11	□□□□□ -1.91
SME1	YOR159C	YHR054C	P38780	354 aa		3.11	□□□□□ -1.91
SME1	YOR159C	MTC6	P38849	526 aa		3.11	□□□□□ -1.91
SME1	YOR159C	REE1	P40893	198 aa		3.11	□□□□□ -1.91
SME1	YOR159C	MDG1	P53885	366 aa		3.11	□□□□□ -1.91
SME1	YOR159C	MRPL35	Q06678	367 aa		3.11	□□□□□ -1.91
SME1	YOR159C	TMC1	Q08422	150 aa	Predicted RBP	3.11	□□□□□ -1.91
SME1	YOR159C	RTN2	Q12443	393 aa		3.11	□□□□□ -1.91
SME1	YOR159C	INH1	P01097	85 aa		3.1	□□□□□ -1.91
SME1	YOR159C	CLN3	P13365	580 aa		3.1	□□□□□ -1.91
SME1	YOR159C	CLB3	P24870	427 aa		3.1	□□□□□ -1.91
SME1	YOR159C	DAL2	P25335	343 aa		3.1	□□□□□ -1.91
SME1	YOR159C	PIM1	P36775	1133 aa		3.1	□□□□□ -1.91
SME1	YOR159C	ARA1	P38115	344 aa		3.1	□□□□□ -1.91
SME1	YOR159C	SWD3	P38123	315 aa		3.1	□□□□□ -1.91
SME1	YOR159C	FRE4	P53746	719 aa		3.1	□□□□□ -1.91
SME1	YOR159C	HER2	Q03557	464 aa		3.1	□□□□□ -1.91
SME1	YOR159C	PPM1	Q04081	328 aa		3.1	□□□□□ -1.91
SME1	YOR159C	HRI1	Q05905	244 aa	Known RBP	3.1	□□□□□ -1.91
SME1	YOR159C	SIL1	Q08199	421 aa		3.1	□□□□□ -1.91
SME1	YOR159C	REX4	Q08237	289 aa		3.1	□□□□□ -1.91
SME1	YOR159C	SLM3	Q12093	417 aa		3.1	□□□□□ -1.91
SME1	YOR159C	HRT3	Q12347	344 aa		3.1	□□□□□ -1.91
SME1	YOR159C	CSF1	Q12150	2958 aa		3.1	□□□□□ -1.91
SME1	YOR159C	ARG4	P04076	463 aa	Predicted RBP	3.09	□□□□□ -1.91
SME1	YOR159C	RIP1	P08067	215 aa		3.09	□□□□□ -1.91
SME1	YOR159C	SRV2	P17555	526 aa	Known RBP	3.09	□□□□□ -1.91
SME1	YOR159C	SLY1	P22213	666 aa		3.09	□□□□□ -1.91
SME1	YOR159C	PFF1	P38244	976 aa		3.09	□□□□□ -1.91
SME1	YOR159C	LYS1	P38998	373 aa	RIP-Chip data	3.09	□□□□□ -1.91	not detected
SME1	YOR159C	DLD2	P46681	530 aa	Known RBP	3.09	□□□□□ -1.91
SME1	YOR159C	FMS1	P50264	508 aa		3.09	□□□□□ -1.91
SME1	YOR159C	SGT1	Q08446	395 aa		3.09	□□□□□ -1.91
SME1	YOR159C	HKR1	P41809	1802 aa		3.09	□□□□□ -1.92
SME1	YOR159C	TEF1	P02994	458 aa	Known RBP	3.08	□□□□□ -1.92
SME1	YOR159C	CLC1	P17891	233 aa		3.08	□□□□□ -1.92
SME1	YOR159C	RVS161	P25343	265 aa	Known RBP	3.08	□□□□□ -1.92
SME1	YOR159C	MNS1	P32906	549 aa		3.08	□□□□□ -1.92
SME1	YOR159C	SAS3	P34218	831 aa		3.08	□□□□□ -1.92
SME1	YOR159C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
SME1	YOR159C	SAS2	P40963	338 aa		3.08	□□□□□ -1.92
SME1	YOR159C	HMS2	P47175	358 aa		3.08	□□□□□ -1.92
SME1	YOR159C	YNR048W	P53740	393 aa		3.08	□□□□□ -1.92
SME1	YOR159C	RPA49	Q01080	415 aa	Predicted RBP	3.08	□□□□□ -1.92
SME1	YOR159C	PEX25	Q02969	394 aa		3.08	□□□□□ -1.92
SME1	YOR159C	YMR181C	Q03231	154 aa		3.08	□□□□□ -1.92
SME1	YOR159C	TAF11	Q04226	346 aa		3.08	□□□□□ -1.92
SME1	YOR159C	COG4	Q06096	861 aa		3.08	□□□□□ -1.92
SME1	YOR159C	SNX3	Q08826	162 aa	Known RBP	3.08	□□□□□ -1.92
SME1	YOR159C	RTP1	Q12751	981 aa		3.08	□□□□□ -1.92
SME1	YOR159C	ADE6	P38972	1358 aa	Known RBP	3.08	□□□□□ -1.92
SME1	YOR159C	ADH2	P00331	348 aa	Known RBP	3.07	□□□□□ -1.92
SME1	YOR159C	ISY1	P21374	235 aa	Predicted RBP	3.07	□□□□□ -1.92
SME1	YOR159C	CDC60	P26637	1090 aa	Known RBP	3.07	□□□□□ -1.92
SME1	YOR159C	KKQ8	P36004	724 aa		3.07	□□□□□ -1.92
SME1	YOR159C	NTC20	P38302	140 aa	Predicted RBP	3.07	□□□□□ -1.92
SME1	YOR159C	PAN6	P40459	309 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms