RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W TY1A-PR2P0CX60 440 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-DR5P0CX65 440 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-ER2P0CX66 440 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-GR3P0CX67 440 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-LR1P0CX68 440 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-MR2P0CX69 440 aa6.21□□□□□ -1.42
LSC1YOR142W GLK1P17709 500 aaKnown RBP6.21□□□□□ -1.42
LSC1YOR142W NAM9P27929 486 aa6.21□□□□□ -1.42
LSC1YOR142W CTS1P29029 562 aa6.21□□□□□ -1.42
LSC1YOR142W CUE2P36075 443 aaKnown RBP6.21□□□□□ -1.42
LSC1YOR142W ROT2P38138 954 aa6.21□□□□□ -1.42
LSC1YOR142W DLD3P39976 496 aaKnown RBP6.21□□□□□ -1.42
LSC1YOR142W RGI1P40043 161 aaPredicted RBP6.21□□□□□ -1.42
LSC1YOR142W CUP9P41817 306 aa6.21□□□□□ -1.42
LSC1YOR142W CCT7P42943 550 aaKnown RBP6.21□□□□□ -1.42
LSC1YOR142W TY1A-JR2P47099 440 aa6.21□□□□□ -1.42
LSC1YOR142W OCA1P50946 238 aaPredicted RBP6.21□□□□□ -1.42
LSC1YOR142W YGL260WP53056 76 aa6.21□□□□□ -1.42
LSC1YOR142W HOS2P53096 452 aaPredicted RBP6.21□□□□□ -1.42
LSC1YOR142W GOR1P53839 350 aa6.21□□□□□ -1.42
LSC1YOR142W RPM2Q02773 1202 aa6.21□□□□□ -1.42
LSC1YOR142W YMR210WQ03649 449 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-DR1Q03856 440 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-ML1Q04706 440 aaKnown RBP6.21□□□□□ -1.42
LSC1YOR142W YLR036CQ07986 203 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-BRQ12217 440 aa6.21□□□□□ -1.42
LSC1YOR142W TPO4Q12256 659 aa6.21□□□□□ -1.42
LSC1YOR142W MMP1Q12372 583 aa6.21□□□□□ -1.42
LSC1YOR142W RPN6Q12377 434 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-NL2Q12470 440 aa6.21□□□□□ -1.42
LSC1YOR142W TY1A-GR2Q12485 440 aa6.21□□□□□ -1.42
LSC1YOR142W CBS2P14905 389 aa6.2□□□□□ -1.42
LSC1YOR142W SEC2P17065 759 aa6.2□□□□□ -1.42
LSC1YOR142W RVS161P25343 265 aaKnown RBP6.2□□□□□ -1.42
LSC1YOR142W CMK1P27466 446 aaKnown RBP6.2□□□□□ -1.42
LSC1YOR142W DGR2P32330 852 aa6.2□□□□□ -1.42
LSC1YOR142W DCG1P32460 244 aa6.2□□□□□ -1.42
LSC1YOR142W TOA1P32773 286 aa6.2□□□□□ -1.42
LSC1YOR142W MSN2P33748 704 aa6.2□□□□□ -1.42
LSC1YOR142W GDT1P38301 280 aaPredicted RBP6.2□□□□□ -1.42
LSC1YOR142W VPS52P39904 641 aa6.2□□□□□ -1.42
LSC1YOR142W PZF1P39933 429 aa6.2□□□□□ -1.42
LSC1YOR142W LAS21P40367 830 aa6.2□□□□□ -1.42
LSC1YOR142W SNO3P43544 222 aa6.2□□□□□ -1.42
LSC1YOR142W YJR115WP47152 169 aa6.2□□□□□ -1.42
LSC1YOR142W YGR067CP53243 804 aa6.2□□□□□ -1.42
LSC1YOR142W YMR310CQ04867 317 aaPredicted RBP6.2□□□□□ -1.42
LSC1YOR142W YOL024WQ08172 172 aa6.2□□□□□ -1.42
LSC1YOR142W MCH5Q08777 521 aa6.2□□□□□ -1.42
LSC1YOR142W YTM1Q12024 460 aaPredicted RBP6.2□□□□□ -1.42
LSC1YOR142W BSC1Q12140 328 aa6.2□□□□□ -1.42
LSC1YOR142W SKS1Q12505 502 aa6.2□□□□□ -1.42
LSC1YOR142W TPK2P06245 380 aa6.19□□□□□ -1.42
LSC1YOR142W SAN1P22470 610 aa6.19□□□□□ -1.42
LSC1YOR142W SCO2P38072 301 aa6.19□□□□□ -1.42
LSC1YOR142W YBR139WP38109 508 aa6.19□□□□□ -1.42
LSC1YOR142W IST2P38250 946 aa6.19□□□□□ -1.42
LSC1YOR142W SER3P40054 469 aa6.19□□□□□ -1.42
LSC1YOR142W RIC1P40395 1056 aa6.19□□□□□ -1.42
LSC1YOR142W QDR2P40474 542 aa6.19□□□□□ -1.42
LSC1YOR142W LYS12P40495 371 aaKnown RBP6.19□□□□□ -1.42
LSC1YOR142W IMA5P40884 581 aa6.19□□□□□ -1.42
LSC1YOR142W SPT20P50875 604 aa6.19□□□□□ -1.42
LSC1YOR142W TPC1P53257 314 aa6.19□□□□□ -1.42
LSC1YOR142W COG2P53271 262 aa6.19□□□□□ -1.42
LSC1YOR142W SUR7P54003 302 aa6.19□□□□□ -1.42
LSC1YOR142W DYN3Q04949 312 aa6.19□□□□□ -1.42
LSC1YOR142W GMC2Q06201 188 aa6.19□□□□□ -1.42
LSC1YOR142W YKL033W-AQ86ZR7 236 aa6.19□□□□□ -1.42
LSC1YOR142W TY4B-PA0A0B7P3V8 1104 aa6.18□□□□□ -1.42
LSC1YOR142W YAP1P19880 650 aaKnown RBP6.18□□□□□ -1.42
LSC1YOR142W RPB5P20434 215 aa6.18□□□□□ -1.42
LSC1YOR142W SEC62P21825 274 aa6.18□□□□□ -1.42
LSC1YOR142W MCK1P21965 375 aaKnown RBP6.18□□□□□ -1.42
LSC1YOR142W NAR1P23503 491 aaKnown RBP6.18□□□□□ -1.42
LSC1YOR142W GPI12P23797 304 aa6.18□□□□□ -1.42
LSC1YOR142W YCL049CP25577 312 aa6.18□□□□□ -1.42
LSC1YOR142W NUP2P32499 720 aa6.18□□□□□ -1.42
LSC1YOR142W FES1P38260 290 aa6.18□□□□□ -1.42
LSC1YOR142W TRM5P38793 499 aa6.18□□□□□ -1.42
LSC1YOR142W TRR2P38816 342 aa6.18□□□□□ -1.42
LSC1YOR142W PTI1P39927 425 aaPredicted RBP6.18□□□□□ -1.42
LSC1YOR142W ALB1P47019 175 aaPredicted RBP6.18□□□□□ -1.42
LSC1YOR142W TMA22P47089 198 aaPredicted RBP6.18□□□□□ -1.42
LSC1YOR142W UBC9P50623 157 aaPredicted RBP6.18□□□□□ -1.42
LSC1YOR142W DIA3P52290 468 aa6.18□□□□□ -1.42
LSC1YOR142W MPA43P53583 542 aaPredicted RBP6.18□□□□□ -1.42
LSC1YOR142W YDR476CQ03362 224 aa6.18□□□□□ -1.42
LSC1YOR142W NUP53Q03790 475 aa6.18□□□□□ -1.42
LSC1YOR142W RAD33Q04231 177 aa6.18□□□□□ -1.42
LSC1YOR142W HSP31Q04432 237 aa6.18□□□□□ -1.42
LSC1YOR142W YLL007CQ07799 665 aa6.18□□□□□ -1.42
LSC1YOR142W YOR376WQ08900 122 aa6.18□□□□□ -1.42
LSC1YOR142W TMS1Q12116 473 aa6.18□□□□□ -1.42
LSC1YOR142W NSL1Q12143 216 aa6.18□□□□□ -1.42
LSC1YOR142W CDC9P04819 755 aa6.17□□□□□ -1.42
LSC1YOR142W YSF3P0C074 85 aaPredicted RBP6.17□□□□□ -1.42
LSC1YOR142W RPL20AP0CX23 172 aaKnown RBP6.17□□□□□ -1.42
LSC1YOR142W RPL20BP0CX24 172 aaPredicted RBP6.17□□□□□ -1.42
LSC1YOR142W AAC3P18238 307 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms