RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W ADD37Q03233 198 aa2.44□□□□□ -2.02
PEP12YOR036W REX4Q08237 289 aa2.44□□□□□ -2.02
PEP12YOR036W IMA2Q08295 589 aa2.44□□□□□ -2.02
PEP12YOR036W SRL2Q12020 392 aa2.44□□□□□ -2.02
PEP12YOR036W PSY3Q12318 242 aa2.44□□□□□ -2.02
PEP12YOR036W SRN2Q99176 213 aa2.44□□□□□ -2.02
PEP12YOR036W ARG4P04076 463 aaPredicted RBP2.43□□□□□ -2.02
PEP12YOR036W CHS1P08004 1131 aa2.43□□□□□ -2.02
PEP12YOR036W NFT1P0CE68 1218 aa2.43□□□□□ -2.02
PEP12YOR036W ATR1P13090 542 aa2.43□□□□□ -2.02
PEP12YOR036W UBA1P22515 1024 aaKnown RBP2.43□□□□□ -2.02
PEP12YOR036W PUT3P25502 979 aaPredicted RBP2.43□□□□□ -2.02
PEP12YOR036W PHO91P27514 894 aa2.43□□□□□ -2.02
PEP12YOR036W TIP1P27654 210 aaPredicted RBP2.43□□□□□ -2.02
PEP12YOR036W NDI1P32340 513 aa2.43□□□□□ -2.02
PEP12YOR036W NDC1P32500 655 aa2.43□□□□□ -2.02
PEP12YOR036W SMI1P32566 505 aa2.43□□□□□ -2.02
PEP12YOR036W CYS4P32582 507 aaKnown RBP2.43□□□□□ -2.02
PEP12YOR036W GLC7P32598 312 aaKnown RBP2.43□□□□□ -2.02
PEP12YOR036W NRP1P32770 719 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
PEP12YOR036W RRP1P35178 278 aaPredicted RBP2.43□□□□□ -2.02
PEP12YOR036W QDR3P38227 689 aa2.43□□□□□ -2.02
PEP12YOR036W STP2P38704 541 aa2.43□□□□□ -2.02
PEP12YOR036W INM1P38710 295 aa2.43□□□□□ -2.02
PEP12YOR036W YHR218WP38899 603 aa2.43□□□□□ -2.02
PEP12YOR036W PAC11P40960 533 aa2.43□□□□□ -2.02
PEP12YOR036W RTT101P47050 842 aa2.43□□□□□ -2.02
PEP12YOR036W HMS2P47175 358 aa2.43□□□□□ -2.02
PEP12YOR036W SSN8P47821 323 aa2.43□□□□□ -2.02
PEP12YOR036W BRO1P48582 844 aa2.43□□□□□ -2.02
PEP12YOR036W AVT4P50944 713 aa2.43□□□□□ -2.02
PEP12YOR036W SHE10P53075 577 aa2.43□□□□□ -2.02
PEP12YOR036W ROG1P53118 685 aa2.43□□□□□ -2.02
PEP12YOR036W PDR16P53860 351 aaKnown RBP2.43□□□□□ -2.02
PEP12YOR036W PRP3Q03338 469 aaPredicted RBP2.43□□□□□ -2.02
PEP12YOR036W RSN1Q03516 953 aa2.43□□□□□ -2.02
PEP12YOR036W MGR3Q04472 501 aa2.43□□□□□ -2.02
PEP12YOR036W IPK1Q06667 281 aa2.43□□□□□ -2.02
PEP12YOR036W NOP6Q07623 225 aaKnown RBP2.43□□□□□ -2.02
PEP12YOR036W YDR061WQ12298 539 aa2.43□□□□□ -2.02
PEP12YOR036W SFG1Q12507 346 aa2.43□□□□□ -2.02
PEP12YOR036W NBL1Q3E7Y6 73 aa2.43□□□□□ -2.02
PEP12YOR036W RPL15AP05748 204 aaKnown RBP2.42□□□□□ -2.02
PEP12YOR036W CDC21P06785 304 aa2.42□□□□□ -2.02
PEP12YOR036W SPO12P17123 173 aa2.42□□□□□ -2.02
PEP12YOR036W RDS1P25611 832 aa2.42□□□□□ -2.02
PEP12YOR036W ITR1P30605 584 aa2.42□□□□□ -2.02
PEP12YOR036W YSC83P32792 385 aa2.42□□□□□ -2.02
PEP12YOR036W LOS1P33418 1100 aaPredicted RBP2.42□□□□□ -2.02
PEP12YOR036W PMU1P36069 295 aa2.42□□□□□ -2.02
PEP12YOR036W AVT5P38176 459 aa2.42□□□□□ -2.02
PEP12YOR036W MTC4P38335 694 aaKnown RBP2.42□□□□□ -2.02
PEP12YOR036W POP2P39008 433 aa2.42□□□□□ -2.02
PEP12YOR036W MST28P39552 234 aa2.42□□□□□ -2.02
PEP12YOR036W EFM3P47163 339 aa2.42□□□□□ -2.02
PEP12YOR036W YIP5P53108 310 aa2.42□□□□□ -2.02
PEP12YOR036W PIB2P53191 635 aa2.42□□□□□ -2.02
PEP12YOR036W POP6P53218 158 aa2.42□□□□□ -2.02
PEP12YOR036W FRE4P53746 719 aa2.42□□□□□ -2.02
PEP12YOR036W UTP6Q02354 440 aaKnown RBP2.42□□□□□ -2.02
PEP12YOR036W MMT1Q03218 510 aa2.42□□□□□ -2.02
PEP12YOR036W RRP9Q06506 573 aaKnown RBP2.42□□□□□ -2.02
PEP12YOR036W BSC6Q08280 497 aa2.42□□□□□ -2.02
PEP12YOR036W TIM18Q08749 192 aa2.42□□□□□ -2.02
PEP12YOR036W DAP1Q12091 152 aa2.42□□□□□ -2.02
PEP12YOR036W YPR022CQ12139 1133 aa2.42□□□□□ -2.02
PEP12YOR036W PKH2Q12236 1081 aaKnown RBP2.42□□□□□ -2.02
PEP12YOR036W RNH203Q12338 110 aa2.42□□□□□ -2.02
PEP12YOR036W DST1P07273 309 aa2.41□□□□□ -2.02
PEP12YOR036W RPL20AP0CX23 172 aaKnown RBP2.41□□□□□ -2.02
PEP12YOR036W RPL20BP0CX24 172 aaPredicted RBP2.41□□□□□ -2.02
PEP12YOR036W TRX1P22217 103 aaKnown RBP2.41□□□□□ -2.02
PEP12YOR036W MNL1P38888 796 aa2.41□□□□□ -2.02
PEP12YOR036W YER079WP40052 210 aaKnown RBP2.41□□□□□ -2.02
PEP12YOR036W RPR2P40571 144 aa2.41□□□□□ -2.02
PEP12YOR036W LAM5P43560 674 aa2.41□□□□□ -2.02
PEP12YOR036W RPA34P47006 233 aaPredicted RBP2.41□□□□□ -2.02
PEP12YOR036W MDE1P47095 244 aa2.41□□□□□ -2.02
PEP12YOR036W SHE4P51534 789 aa2.41□□□□□ -2.02
PEP12YOR036W COS10P52924 374 aa2.41□□□□□ -2.02
PEP12YOR036W RTT102P53330 157 aa2.41□□□□□ -2.02
PEP12YOR036W YNR068CP53754 272 aa2.41□□□□□ -2.02
PEP12YOR036W YNL143CP53908 130 aa2.41□□□□□ -2.02
PEP12YOR036W STD1Q02794 444 aa2.41□□□□□ -2.02
PEP12YOR036W BET5Q03630 159 aa2.41□□□□□ -2.02
PEP12YOR036W URC2Q04411 772 aa2.41□□□□□ -2.02
PEP12YOR036W PML1Q07930 204 aaPredicted RBP2.41□□□□□ -2.02
PEP12YOR036W AAD15Q08361 143 aa2.41□□□□□ -2.02
PEP12YOR036W MUM3Q08750 479 aa2.41□□□□□ -2.02
PEP12YOR036W REX3Q12090 404 aa2.41□□□□□ -2.02
PEP12YOR036W AYT1Q12226 474 aa2.41□□□□□ -2.02
PEP12YOR036W RAD61Q99359 647 aa2.41□□□□□ -2.02
PEP12YOR036W TEF1P02994 458 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W HEM2P05373 342 aa2.4□□□□□ -2.03
PEP12YOR036W RPL12AP0CX53 165 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W RPL12BP0CX54 165 aa2.4□□□□□ -2.03
PEP12YOR036W SCH9P11792 824 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W TAL1P15019 335 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W ATS1P31386 333 aa2.4□□□□□ -2.03
PEP12YOR036W MIX23P38162 196 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms