RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W SPO19Q03029 223 aa5.64□□□□□ -1.51
ATG4YNL223W YMR099CQ03161 297 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W TRM82Q03774 444 aa5.64□□□□□ -1.51
ATG4YNL223W DBP9Q06218 594 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W YLR036CQ07986 203 aa5.64□□□□□ -1.51
ATG4YNL223W RRT8Q08219 342 aa5.64□□□□□ -1.51
ATG4YNL223W STE7P06784 515 aa5.63□□□□□ -1.51
ATG4YNL223W MER1P16523 270 aa5.63□□□□□ -1.51
ATG4YNL223W GRR1P24814 1151 aa5.63□□□□□ -1.51
ATG4YNL223W BUB3P26449 341 aa5.63□□□□□ -1.51
ATG4YNL223W ERG1P32476 496 aaKnown RBP5.63□□□□□ -1.51
ATG4YNL223W DOM34P33309 386 aa5.63□□□□□ -1.51
ATG4YNL223W SPC42P36094 363 aa5.63□□□□□ -1.51
ATG4YNL223W FMP46P36141 133 aaKnown RBP5.63□□□□□ -1.51
ATG4YNL223W BNA4P38169 460 aa5.63□□□□□ -1.51
ATG4YNL223W MUM2P38236 366 aa5.63□□□□□ -1.51
ATG4YNL223W YHR177WP38867 453 aa5.63□□□□□ -1.51
ATG4YNL223W PCF11P39081 626 aaPredicted RBP5.63□□□□□ -1.51
ATG4YNL223W ELO1P39540 310 aa5.63□□□□□ -1.51
ATG4YNL223W LRO1P40345 661 aa5.63□□□□□ -1.51
ATG4YNL223W QDR2P40474 542 aa5.63□□□□□ -1.51
ATG4YNL223W EMC2P47133 292 aaKnown RBP5.63□□□□□ -1.51
ATG4YNL223W FHN1P53279 174 aa5.63□□□□□ -1.51
ATG4YNL223W CSL4P53859 292 aaPredicted RBP5.63□□□□□ -1.51
ATG4YNL223W RAD30Q04049 632 aa5.63□□□□□ -1.51
ATG4YNL223W ATG17Q06410 417 aa5.63□□□□□ -1.51
ATG4YNL223W ERF2Q06551 359 aa5.63□□□□□ -1.51
ATG4YNL223W XYL2Q07993 356 aa5.63□□□□□ -1.51
ATG4YNL223W YOL107WQ12239 342 aa5.63□□□□□ -1.51
ATG4YNL223W SLH1P53327 1967 aaKnown RBP5.62□□□□□ -1.51
ATG4YNL223W RAS1P01119 309 aa5.62□□□□□ -1.51
ATG4YNL223W GAL7P08431 366 aa5.62□□□□□ -1.51
ATG4YNL223W TRM1P15565 570 aaKnown RBP5.62□□□□□ -1.51
ATG4YNL223W RPS1BP23248 255 aaKnown RBP5.62□□□□□ -1.51
ATG4YNL223W RNQ1P25367 405 aa5.62□□□□□ -1.51
ATG4YNL223W RPC82P32349 654 aa5.62□□□□□ -1.51
ATG4YNL223W LHP1P33399 275 aaKnown RBP5.62□□□□□ -1.51
ATG4YNL223W ATG14P38270 344 aa5.62□□□□□ -1.51
ATG4YNL223W YHR112CP38716 378 aa5.62□□□□□ -1.51
ATG4YNL223W MTG2P38860 518 aa5.62□□□□□ -1.51
ATG4YNL223W LYS1P38998 373 aaRIP-Chip data5.62□□□□□ -1.51not detected
ATG4YNL223W CEM1P39525 442 aa5.62□□□□□ -1.51
ATG4YNL223W AIM2P39721 246 aa5.62□□□□□ -1.51
ATG4YNL223W PAC11P40960 533 aa5.62□□□□□ -1.51
ATG4YNL223W FAR7P43592 221 aa5.62□□□□□ -1.51
ATG4YNL223W CIS3P47001 227 aa5.62□□□□□ -1.51
ATG4YNL223W PAC10P48363 199 aa5.62□□□□□ -1.51
ATG4YNL223W ROG1P53118 685 aa5.62□□□□□ -1.51
ATG4YNL223W EGD1Q02642 157 aaKnown RBP5.62□□□□□ -1.51
ATG4YNL223W SMP3Q04174 516 aa5.62□□□□□ -1.51
ATG4YNL223W YML096WQ04489 525 aa5.62□□□□□ -1.51
ATG4YNL223W ATG38Q05789 226 aaKnown RBP5.62□□□□□ -1.51
ATG4YNL223W SPO77Q06134 477 aa5.62□□□□□ -1.51
ATG4YNL223W SWA2Q06677 668 aa5.62□□□□□ -1.51
ATG4YNL223W THI73Q07904 523 aa5.62□□□□□ -1.51
ATG4YNL223W RPN8Q08723 338 aaKnown RBP5.62□□□□□ -1.51
ATG4YNL223W PUS9Q12069 462 aa5.62□□□□□ -1.51
ATG4YNL223W RIB3Q99258 208 aa5.62□□□□□ -1.51
ATG4YNL223W PUT2P07275 575 aa5.61□□□□□ -1.51
ATG4YNL223W CDC4P07834 779 aa5.61□□□□□ -1.51
ATG4YNL223W KSS1P14681 368 aa5.61□□□□□ -1.51
ATG4YNL223W CBS2P14905 389 aa5.61□□□□□ -1.51
ATG4YNL223W URE2P23202 354 aaKnown RBP5.61□□□□□ -1.51
ATG4YNL223W CNA1P23287 553 aa5.61□□□□□ -1.51
ATG4YNL223W RPL5P26321 297 aaKnown RBP5.61□□□□□ -1.51
ATG4YNL223W YIM1P28625 365 aa5.61□□□□□ -1.51
ATG4YNL223W MKK1P32490 508 aa5.61□□□□□ -1.51
ATG4YNL223W SSE2P32590 693 aaKnown RBP5.61□□□□□ -1.51
ATG4YNL223W NRP1P32770 719 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
ATG4YNL223W SFA1P32771 386 aa5.61□□□□□ -1.51
ATG4YNL223W CDC13P32797 924 aaKnown RBP5.61□□□□□ -1.51
ATG4YNL223W SKN1P33336 771 aa5.61□□□□□ -1.51
ATG4YNL223W HCS1P34243 683 aa5.61□□□□□ -1.51
ATG4YNL223W ECM8P38246 354 aa5.61□□□□□ -1.51
ATG4YNL223W YAR028WP39548 234 aa5.61□□□□□ -1.51
ATG4YNL223W FAU1P40099 211 aa5.61□□□□□ -1.51
ATG4YNL223W NEO1P40527 1151 aa5.61□□□□□ -1.51
ATG4YNL223W DAM1P53267 343 aa5.61□□□□□ -1.51
ATG4YNL223W YGR250CP53316 781 aaKnown RBP5.61□□□□□ -1.51
ATG4YNL223W TMA20P89886 181 aaPredicted RBP5.61□□□□□ -1.51
ATG4YNL223W DIN7Q12086 430 aa5.61□□□□□ -1.51
ATG4YNL223W MF(ALPHA)1P01149 165 aa5.6□□□□□ -1.51
ATG4YNL223W HTS1P07263 546 aaKnown RBP5.6□□□□□ -1.51
ATG4YNL223W TAL1P15019 335 aaKnown RBP5.6□□□□□ -1.51
ATG4YNL223W RHB1P25378 209 aa5.6□□□□□ -1.51
ATG4YNL223W SSH4P32343 579 aa5.6□□□□□ -1.51
ATG4YNL223W NTH1P32356 751 aa5.6□□□□□ -1.51
ATG4YNL223W SUI1P32911 108 aaKnown RBP5.6□□□□□ -1.51
ATG4YNL223W LHS1P36016 881 aa5.6□□□□□ -1.51
ATG4YNL223W DOA1P36037 715 aa5.6□□□□□ -1.51
ATG4YNL223W LYS12P40495 371 aaKnown RBP5.6□□□□□ -1.51
ATG4YNL223W YFL066CP43538 392 aa5.6□□□□□ -1.51
ATG4YNL223W CAK1P43568 368 aaPredicted RBP5.6□□□□□ -1.51
ATG4YNL223W YGR079WP53249 370 aa5.6□□□□□ -1.51
ATG4YNL223W SUN4P53616 420 aa5.6□□□□□ -1.51
ATG4YNL223W YNL181WP53878 407 aa5.6□□□□□ -1.51
ATG4YNL223W RHO4Q00246 291 aa5.6□□□□□ -1.51
ATG4YNL223W SWP1Q02795 286 aa5.6□□□□□ -1.51
ATG4YNL223W YDR179W-AQ03983 463 aa5.6□□□□□ -1.51
ATG4YNL223W APC4Q04601 652 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms