RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	TRX1	P22217	103 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	RPS2	P25443	254 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	EFB1	P32471	206 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	RPN2	P32565	945 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	MRP4	P32902	394 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	SPC34	P36131	295 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	POP4	P38336	279 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	PCA1	P38360	1216 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	YND1	P40009	630 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	MET28	P40573	187 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	RMD8	P43620	662 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	MND1	P53102	219 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	DUG3	P53871	357 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	ALG11	P53954	548 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	YVH1	Q02256	364 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	SHR3	Q02774	210 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	YMR102C	Q03177	834 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	CWC21	Q03375	135 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	FMP42	Q04991	504 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	KAP95	Q06142	861 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	TSR2	Q06672	205 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	RLM1	Q12224	676 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	AVL9	Q12500	764 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	JIP3	O13555	125 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	ADE4	P04046	510 aa	Known RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	GAL80	P04387	435 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	CHS1	P08004	1131 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	HEM15	P16622	393 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	CDC10	P25342	322 aa	Known RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	OCA4	P25366	362 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	YCR051W	P25631	222 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	SEC1	P30619	724 aa	Known RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	TPS2	P31688	896 aa	Known RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	WBP1	P33767	430 aa	Known RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	YSW1	P38280	609 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	SWC5	P38326	303 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	YER186C	P40101	306 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	DSN1	P40568	576 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	LAM5	P43560	674 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	IRC6	P43615	237 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	GUF1	P46943	645 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	SNG1	P46950	547 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	ATG27	P46989	271 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	YJR054W	P47114	497 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	YGR126W	P53274	230 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	YNL247W	P53852	767 aa	Known RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	YNL040W	P53960	456 aa	Predicted RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	YPL014W	Q02606	381 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	MZM1	Q03429	123 aa	Predicted RBP	3.48	□□□□□ -1.85
TPM1	YNL079C	FIN1	Q03898	291 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	ARO80	Q04052	950 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	YMR027W	Q04371	470 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	PRM6	Q04705	352 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	DIC1	Q06143	298 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	CDD1	Q06549	142 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	YDR018C	Q12185	396 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	NCA2	Q12374	616 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	EMP46	Q12396	444 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	RRD2	Q12461	358 aa		3.48	□□□□□ -1.85
TPM1	YNL079C	ARG3	P05150	338 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	CMD1	P06787	147 aa	Known RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	BAR1	P12630	587 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	CDC23	P16522	626 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	SRV2	P17555	526 aa	Known RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	SLY1	P22213	666 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	SGV1	P23293	657 aa	Known RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	MRPL25	P23369	157 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	ELO2	P25358	347 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	MGT1	P26188	188 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	MEI4	P29467	408 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	BUD2	P33314	1104 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	LOS1	P33418	1100 aa	Predicted RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	SRB2	P34162	210 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	KDX1	P36005	433 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	DUG2	P38149	878 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	MSR1	P38714	643 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	DSE1	P40077	573 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	YIL054W	P40524	105 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	MKT1	P40850	830 aa	Known RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	AXL1	P40851	1208 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	ARF3	P40994	183 aa	RIP-Chip data	3.47	□□□□□ -1.85	not detected
TPM1	YNL079C	AZF1	P41696	914 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	BUD32	P53323	261 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
TPM1	YNL079C	YNL134C	P53912	376 aa	Known RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	RHO4	Q00246	291 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	TOF2	Q02208	771 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	MSS11	Q03825	758 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	YDR415C	Q04033	374 aa	Predicted RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	FAR8	Q05040	523 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	DIS3	Q08162	1001 aa	Known RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	TAF10	Q12030	206 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	VPS54	Q12071	889 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	PDH1	Q12428	516 aa	Known RBP	3.47	□□□□□ -1.85
TPM1	YNL079C	CTF3	Q12748	733 aa		3.47	□□□□□ -1.85
TPM1	YNL079C	INH1	P01097	85 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	PEP4	P07267	405 aa	Known RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	PRP16	P15938	1071 aa	Predicted RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	TYR1	P20049	452 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	ACH1	P32316	526 aa		3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms