RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C OAR1P35731 278 aa8.7□□□□□ -1.02
SEC61YLR378C BNA4P38169 460 aa8.7□□□□□ -1.02
SEC61YLR378C EHT1P38295 451 aa8.7□□□□□ -1.02
SEC61YLR378C LYS1P38998 373 aaRIP-Chip data8.7□□□□□ -1.02 RIP-Chip
SEC61YLR378C CEM1P39525 442 aa8.7□□□□□ -1.02
SEC61YLR378C TPA1P40032 644 aaKnown RBP8.7□□□□□ -1.02
SEC61YLR378C MSS2P40990 351 aa8.7□□□□□ -1.02
SEC61YLR378C YGR201CP42936 225 aa8.7□□□□□ -1.02
SEC61YLR378C RAD30Q04049 632 aa8.7□□□□□ -1.02
SEC61YLR378C APC4Q04601 652 aa8.7□□□□□ -1.02
SEC61YLR378C REH1Q06709 432 aa8.7□□□□□ -1.02
SEC61YLR378C YOL107WQ12239 342 aa8.7□□□□□ -1.02
SEC61YLR378C RIB3Q99258 208 aa8.7□□□□□ -1.02
SEC61YLR378C HTS1P07263 546 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C PUT2P07275 575 aa8.69□□□□□ -1.02
SEC61YLR378C GAL7P08431 366 aa8.69□□□□□ -1.02
SEC61YLR378C RPS1BP23248 255 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C CNA1P23287 553 aa8.69□□□□□ -1.02
SEC61YLR378C PTP1P25044 335 aa8.69□□□□□ -1.02
SEC61YLR378C CTR86P25355 563 aa8.69□□□□□ -1.02
SEC61YLR378C RPL5P26321 297 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C CDC13P32797 924 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C GDH2P33327 1092 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C HCS1P34243 683 aa8.69□□□□□ -1.02
SEC61YLR378C FMP46P36141 133 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C YBR285WP38354 144 aa8.69□□□□□ -1.02
SEC61YLR378C WSC4P38739 605 aa8.69□□□□□ -1.02
SEC61YLR378C SSZ1P38788 538 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C YHR177WP38867 453 aa8.69□□□□□ -1.02
SEC61YLR378C RIX1P38883 763 aaPredicted RBP8.69□□□□□ -1.02
SEC61YLR378C AIM2P39721 246 aa8.69□□□□□ -1.02
SEC61YLR378C LRO1P40345 661 aa8.69□□□□□ -1.02
SEC61YLR378C YJL068CP40363 299 aa8.69□□□□□ -1.02
SEC61YLR378C HXT16P47185 567 aa8.69□□□□□ -1.02
SEC61YLR378C YNL181WP53878 407 aa8.69□□□□□ -1.02
SEC61YLR378C HXT15P54854 567 aa8.69□□□□□ -1.02
SEC61YLR378C SWP1Q02795 286 aa8.69□□□□□ -1.02
SEC61YLR378C YPL107WQ02873 248 aa8.69□□□□□ -1.02
SEC61YLR378C KRE28Q04431 385 aa8.69□□□□□ -1.02
SEC61YLR378C RRP45Q05636 305 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C YPR022CQ12139 1133 aa8.69□□□□□ -1.02
SEC61YLR378C RRP12Q12754 1228 aaKnown RBP8.69□□□□□ -1.02
SEC61YLR378C MF(ALPHA)1P01149 165 aa8.68□□□□□ -1.02
SEC61YLR378C AGP1P25376 633 aa8.68□□□□□ -1.02
SEC61YLR378C OMA1P36163 345 aa8.68□□□□□ -1.02
SEC61YLR378C YBR138CP38277 524 aa8.68□□□□□ -1.02
SEC61YLR378C MPM1P40364 252 aa8.68□□□□□ -1.02
SEC61YLR378C ESF2P53743 316 aaKnown RBP8.68□□□□□ -1.02
SEC61YLR378C YDR262WQ12331 272 aa8.68□□□□□ -1.02
SEC61YLR378C MHF1Q3E835 90 aa8.68□□□□□ -1.02
SEC61YLR378C SLH1P53327 1967 aaKnown RBP8.68□□□□□ -1.02
SEC61YLR378C MGR1P25573 417 aa8.67□□□□□ -1.02
SEC61YLR378C PRO1P32264 428 aa8.67□□□□□ -1.02
SEC61YLR378C NTH1P32356 751 aa8.67□□□□□ -1.02
SEC61YLR378C SRB5P32585 307 aa8.67□□□□□ -1.02
SEC61YLR378C LHP1P33399 275 aaKnown RBP8.67□□□□□ -1.02
SEC61YLR378C LOT5P34234 306 aa8.67□□□□□ -1.02
SEC61YLR378C FAU1P40099 211 aa8.67□□□□□ -1.02
SEC61YLR378C VRG4P40107 337 aa8.67□□□□□ -1.02
SEC61YLR378C CIS3P47001 227 aa8.67□□□□□ -1.02
SEC61YLR378C MON1P53129 644 aa8.67□□□□□ -1.02
SEC61YLR378C RSC9Q03124 581 aa8.67□□□□□ -1.02
SEC61YLR378C YML096WQ04489 525 aa8.67□□□□□ -1.02
SEC61YLR378C SWA2Q06677 668 aa8.67□□□□□ -1.02
SEC61YLR378C LEU9Q12166 604 aaKnown RBP8.67□□□□□ -1.02
SEC61YLR378C TSC13Q99190 310 aa8.67□□□□□ -1.02
SEC61YLR378C PNO1Q99216 274 aaKnown RBP8.67□□□□□ -1.02
SEC61YLR378C YPR117WQ06116 2489 aa8.67□□□□□ -1.02
SEC61YLR378C ZWF1P11412 505 aaKnown RBP8.66□□□□□ -1.02
SEC61YLR378C NPR1P22211 790 aa8.66□□□□□ -1.02
SEC61YLR378C HOG1P32485 435 aa8.66□□□□□ -1.02
SEC61YLR378C PRP21P32524 280 aaPredicted RBP8.66□□□□□ -1.02
SEC61YLR378C SUI1P32911 108 aaKnown RBP8.66□□□□□ -1.02
SEC61YLR378C SKN1P33336 771 aa8.66□□□□□ -1.02
SEC61YLR378C DOA1P36037 715 aa8.66□□□□□ -1.02
SEC61YLR378C YKR015CP36111 568 aa8.66□□□□□ -1.02
SEC61YLR378C APE4P38821 490 aa8.66□□□□□ -1.02
SEC61YLR378C QDR2P40474 542 aa8.66□□□□□ -1.02
SEC61YLR378C DAM1P53267 343 aa8.66□□□□□ -1.02
SEC61YLR378C YMR099CQ03161 297 aaKnown RBP8.66□□□□□ -1.02
SEC61YLR378C RRN11Q04712 507 aa8.66□□□□□ -1.02
SEC61YLR378C RQC1Q05468 723 aaKnown RBP8.66□□□□□ -1.02
SEC61YLR378C IRC13Q08630 104 aa8.66□□□□□ -1.02
SEC61YLR378C PBS2P08018 668 aa8.65□□□□□ -1.02
SEC61YLR378C RPS5P26783 225 aaKnown RBP8.65□□□□□ -1.02
SEC61YLR378C MKK1P32490 508 aa8.65□□□□□ -1.02
SEC61YLR378C TEF4P36008 412 aaKnown RBP8.65□□□□□ -1.02
SEC61YLR378C BIG1P38813 335 aa8.65□□□□□ -1.02
SEC61YLR378C RPL10P41805 221 aaKnown RBP8.65□□□□□ -1.02
SEC61YLR378C FHN1P53279 174 aa8.65□□□□□ -1.02
SEC61YLR378C SUN4P53616 420 aa8.65□□□□□ -1.02
SEC61YLR378C RIM13Q03792 727 aa8.65□□□□□ -1.02
SEC61YLR378C YDL129WQ07555 291 aa8.65□□□□□ -1.02
SEC61YLR378C MRX4Q12467 430 aa8.65□□□□□ -1.02
SEC61YLR378C SKS1Q12505 502 aa8.65□□□□□ -1.02
SEC61YLR378C YKL033W-AQ86ZR7 236 aa8.65□□□□□ -1.02
SEC61YLR378C BEM2P39960 2167 aaKnown RBP8.64□□□□□ -1.03
SEC61YLR378C TPK3P05986 398 aa8.64□□□□□ -1.03
SEC61YLR378C ECM8P38246 354 aa8.64□□□□□ -1.03
SEC61YLR378C YLF2P38746 405 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms