RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YKU80Q04437 629 aa4.35□□□□□ -1.71
CBF5YLR175W YML096WQ04489 525 aa4.35□□□□□ -1.71
CBF5YLR175W SWF1Q04629 336 aa4.35□□□□□ -1.71
CBF5YLR175W RRN11Q04712 507 aa4.35□□□□□ -1.71
CBF5YLR175W YLL007CQ07799 665 aa4.35□□□□□ -1.71
CBF5YLR175W YOL131WQ08270 108 aa4.35□□□□□ -1.71
CBF5YLR175W ALG6Q12001 544 aaKnown RBP4.35□□□□□ -1.71
CBF5YLR175W PUS9Q12069 462 aa4.35□□□□□ -1.71
CBF5YLR175W MLH3Q12083 715 aa4.35□□□□□ -1.71
CBF5YLR175W YPR022CQ12139 1133 aa4.35□□□□□ -1.71
CBF5YLR175W LEU9Q12166 604 aaKnown RBP4.35□□□□□ -1.71
CBF5YLR175W YOR114WQ12219 294 aa4.35□□□□□ -1.71
CBF5YLR175W RPN5Q12250 445 aaKnown RBP4.35□□□□□ -1.71
CBF5YLR175W YVC1Q12324 675 aa4.35□□□□□ -1.71
CBF5YLR175W RPN6Q12377 434 aa4.35□□□□□ -1.71
CBF5YLR175W YLR111WQ12528 110 aa4.35□□□□□ -1.71
CBF5YLR175W ADF1Q2V2Q1 113 aa4.35□□□□□ -1.71
CBF5YLR175W LAG2Q92325 660 aa4.35□□□□□ -1.71
CBF5YLR175W CBP2P03874 630 aaPredicted RBP4.34□□□□□ -1.71
CBF5YLR175W ARG81P05085 880 aa4.34□□□□□ -1.71
CBF5YLR175W ATP4P05626 244 aa4.34□□□□□ -1.71
CBF5YLR175W STE7P06784 515 aa4.34□□□□□ -1.71
CBF5YLR175W GAL7P08431 366 aa4.34□□□□□ -1.71
CBF5YLR175W TYR1P20049 452 aa4.34□□□□□ -1.71
CBF5YLR175W PRP2P20095 876 aaPredicted RBP4.34□□□□□ -1.71
CBF5YLR175W PTP1P25044 335 aa4.34□□□□□ -1.71
CBF5YLR175W DPH5P32469 300 aaPredicted RBP4.34□□□□□ -1.71
CBF5YLR175W PET127P32606 800 aa4.34□□□□□ -1.71
CBF5YLR175W CAT2P32796 670 aaKnown RBP4.34□□□□□ -1.71
CBF5YLR175W FMP46P36141 133 aaKnown RBP4.34□□□□□ -1.71
CBF5YLR175W ASC1P38011 319 aaKnown RBP4.34□□□□□ -1.71
CBF5YLR175W MCM7P38132 845 aa4.34□□□□□ -1.71
CBF5YLR175W MED8P38304 223 aa4.34□□□□□ -1.71
CBF5YLR175W YHR218WP38899 603 aa4.34□□□□□ -1.71
CBF5YLR175W LYS1P38998 373 aaRIP-Chip data4.34□□□□□ -1.71not detected
CBF5YLR175W MET30P39014 640 aa4.34□□□□□ -1.71
CBF5YLR175W ERV46P39727 415 aa4.34□□□□□ -1.71
CBF5YLR175W AZF1P41696 914 aa4.34□□□□□ -1.71
CBF5YLR175W NOP9P47077 666 aaKnown RBP4.34□□□□□ -1.71
CBF5YLR175W COS6P53344 381 aa4.34□□□□□ -1.71
CBF5YLR175W DSL1P53847 754 aa4.34□□□□□ -1.71
CBF5YLR175W UGO1Q03327 502 aa4.34□□□□□ -1.71
CBF5YLR175W MFG1Q07684 458 aa4.34□□□□□ -1.71
CBF5YLR175W COS7Q07788 383 aa4.34□□□□□ -1.71
CBF5YLR175W REX4Q08237 289 aa4.34□□□□□ -1.71
CBF5YLR175W YOL159CQ08300 171 aa4.34□□□□□ -1.71
CBF5YLR175W IRC13Q08630 104 aa4.34□□□□□ -1.71
CBF5YLR175W YPL066WQ12194 479 aa4.34□□□□□ -1.71
CBF5YLR175W RUP1Q12242 671 aa4.34□□□□□ -1.71
CBF5YLR175W YDR262WQ12331 272 aa4.34□□□□□ -1.71
CBF5YLR175W NSI1Q12457 570 aa4.34□□□□□ -1.71
CBF5YLR175W BCY1P07278 416 aaKnown RBP4.33□□□□□ -1.72
CBF5YLR175W DAP2P18962 818 aa4.33□□□□□ -1.72
CBF5YLR175W ARE1P25628 610 aa4.33□□□□□ -1.72
CBF5YLR175W ERG1P32476 496 aaKnown RBP4.33□□□□□ -1.72
CBF5YLR175W NGG1P32494 702 aa4.33□□□□□ -1.72
CBF5YLR175W SRB5P32585 307 aa4.33□□□□□ -1.72
CBF5YLR175W SEC17P32602 292 aa4.33□□□□□ -1.72
CBF5YLR175W SFA1P32771 386 aa4.33□□□□□ -1.72
CBF5YLR175W UTH1P36135 365 aa4.33□□□□□ -1.72
CBF5YLR175W SKG1P36169 355 aa4.33□□□□□ -1.72
CBF5YLR175W SCO2P38072 301 aa4.33□□□□□ -1.72
CBF5YLR175W PDX3P38075 228 aaKnown RBP4.33□□□□□ -1.72
CBF5YLR175W MNN9P39107 395 aaKnown RBP4.33□□□□□ -1.72
CBF5YLR175W FAA2P39518 744 aa4.33□□□□□ -1.72
CBF5YLR175W VRG4P40107 337 aa4.33□□□□□ -1.72
CBF5YLR175W YIL001WP40560 513 aa4.33□□□□□ -1.72
CBF5YLR175W GUS1P46655 708 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
CBF5YLR175W FMP33P46998 180 aa4.33□□□□□ -1.72
CBF5YLR175W KEL2P50090 882 aa4.33□□□□□ -1.72
CBF5YLR175W BIO3P50277 480 aa4.33□□□□□ -1.72
CBF5YLR175W GPI1P53306 609 aa4.33□□□□□ -1.72
CBF5YLR175W ARE2P53629 642 aaKnown RBP4.33□□□□□ -1.72
CBF5YLR175W YNR068CP53754 272 aa4.33□□□□□ -1.72
CBF5YLR175W YNL095CP53932 642 aa4.33□□□□□ -1.72
CBF5YLR175W ATP25Q03153 612 aa4.33□□□□□ -1.72
CBF5YLR175W YMR010WQ03687 405 aa4.33□□□□□ -1.72
CBF5YLR175W ATG38Q05789 226 aaKnown RBP4.33□□□□□ -1.72
CBF5YLR175W PDR8Q06149 701 aa4.33□□□□□ -1.72
CBF5YLR175W YLR125WQ12138 136 aa4.33□□□□□ -1.72
CBF5YLR175W SNF8Q12483 233 aa4.33□□□□□ -1.72
CBF5YLR175W RRP12Q12754 1228 aaKnown RBP4.33□□□□□ -1.72
CBF5YLR175W YGR161W-CQ3E744 92 aa4.33□□□□□ -1.72
CBF5YLR175W CAN1P04817 590 aa4.32□□□□□ -1.72
CBF5YLR175W UNG1P12887 359 aa4.32□□□□□ -1.72
CBF5YLR175W GAL3P13045 520 aa4.32□□□□□ -1.72
CBF5YLR175W YAK1P14680 807 aa4.32□□□□□ -1.72
CBF5YLR175W CBS2P14905 389 aa4.32□□□□□ -1.72
CBF5YLR175W CMK2P22517 447 aa4.32□□□□□ -1.72
CBF5YLR175W CLB3P24870 427 aa4.32□□□□□ -1.72
CBF5YLR175W YCL049CP25577 312 aa4.32□□□□□ -1.72
CBF5YLR175W RPT5P33297 434 aaKnown RBP4.32□□□□□ -1.72
CBF5YLR175W PEX6P33760 1030 aa4.32□□□□□ -1.72
CBF5YLR175W AST1P35183 429 aa4.32□□□□□ -1.72
CBF5YLR175W DOA1P36037 715 aa4.32□□□□□ -1.72
CBF5YLR175W MNN2P38069 597 aa4.32□□□□□ -1.72
CBF5YLR175W TDP1P38319 544 aa4.32□□□□□ -1.72
CBF5YLR175W BEM4P39011 633 aa4.32□□□□□ -1.72
CBF5YLR175W MBP1P39678 833 aa4.32□□□□□ -1.72
CBF5YLR175W MTW1P39731 289 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms