RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W AAP1P37898 856 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W VRG4P40107 337 aa1.88□□□□□ -2.11
CFT2YLR115W SAD1P43589 448 aa1.88□□□□□ -2.11
CFT2YLR115W CTK2P46962 323 aa1.88□□□□□ -2.11
CFT2YLR115W YTP1P53584 459 aa1.88□□□□□ -2.11
CFT2YLR115W DSL1P53847 754 aa1.88□□□□□ -2.11
CFT2YLR115W YFH1Q07540 174 aa1.88□□□□□ -2.11
CFT2YLR115W YEH1Q07804 573 aa1.88□□□□□ -2.11
CFT2YLR115W RKM1Q08961 583 aaPredicted RBP1.88□□□□□ -2.11
CFT2YLR115W YLR049CQ12110 428 aa1.88□□□□□ -2.11
CFT2YLR115W MED2Q12124 431 aa1.88□□□□□ -2.11
CFT2YLR115W GIS3Q12418 502 aa1.88□□□□□ -2.11
CFT2YLR115W CFT1Q06632 1357 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W YBR085C-AO43137 85 aa1.88□□□□□ -2.11
CFT2YLR115W ILV5P06168 395 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W HIP1P06775 603 aa1.88□□□□□ -2.11
CFT2YLR115W PRB1P09232 635 aa1.88□□□□□ -2.11
CFT2YLR115W LPD1P09624 499 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W SEC63P14906 663 aa1.88□□□□□ -2.11
CFT2YLR115W YSR3P23501 404 aa1.88□□□□□ -2.11
CFT2YLR115W ERG8P24521 451 aa1.88□□□□□ -2.11
CFT2YLR115W PET18P25362 215 aa1.88□□□□□ -2.11
CFT2YLR115W GID7P25569 745 aa1.88□□□□□ -2.11
CFT2YLR115W MGR1P25573 417 aa1.88□□□□□ -2.11
CFT2YLR115W PRR1P28708 518 aa1.88□□□□□ -2.11
CFT2YLR115W NDI1P32340 513 aa1.88□□□□□ -2.11
CFT2YLR115W ERG1P32476 496 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W ECM25P32525 599 aa1.88□□□□□ -2.11
CFT2YLR115W NTR2P36118 322 aaPredicted RBP1.88□□□□□ -2.11
CFT2YLR115W ATP3P38077 311 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W SLM4P38247 162 aa1.88□□□□□ -2.11
CFT2YLR115W ARP1P38696 384 aa1.88□□□□□ -2.11
CFT2YLR115W MTW1P39731 289 aa1.88□□□□□ -2.11
CFT2YLR115W RTR1P40084 226 aaPredicted RBP1.88□□□□□ -2.11
CFT2YLR115W SLZ1P40167 298 aa1.88□□□□□ -2.11
CFT2YLR115W RPN11P43588 306 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W URB2P47108 1174 aa1.88□□□□□ -2.11
CFT2YLR115W YGR149WP48236 432 aa1.88□□□□□ -2.11
CFT2YLR115W TWF1P53250 332 aa1.88□□□□□ -2.11
CFT2YLR115W YGR117CP53270 476 aa1.88□□□□□ -2.11
CFT2YLR115W RPT4P53549 437 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W YNL181WP53878 407 aa1.88□□□□□ -2.11
CFT2YLR115W MUB1Q03162 620 aa1.88□□□□□ -2.11
CFT2YLR115W PDS5Q04264 1277 aa1.88□□□□□ -2.11
CFT2YLR115W RQC1Q05468 723 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W RRP45Q05636 305 aaKnown RBP1.88□□□□□ -2.11
CFT2YLR115W BOP2Q06150 570 aa1.88□□□□□ -2.11
CFT2YLR115W VPS74Q06385 345 aa1.88□□□□□ -2.11
CFT2YLR115W GPN3Q06543 272 aa1.88□□□□□ -2.11
CFT2YLR115W DAP1Q12091 152 aa1.88□□□□□ -2.11
CFT2YLR115W VPS63O13549 108 aa1.87□□□□□ -2.11
CFT2YLR115W CDC36P06100 191 aaPredicted RBP1.87□□□□□ -2.11
CFT2YLR115W SSA3P09435 649 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W BAR1P12630 587 aa1.87□□□□□ -2.11
CFT2YLR115W URA4P20051 364 aa1.87□□□□□ -2.11
CFT2YLR115W HIR2P32480 875 aa1.87□□□□□ -2.11
CFT2YLR115W YME2P32843 850 aa1.87□□□□□ -2.11
CFT2YLR115W CYM1P32898 989 aa1.87□□□□□ -2.11
CFT2YLR115W PDR3P33200 976 aa1.87□□□□□ -2.11
CFT2YLR115W PMT1P33775 817 aa1.87□□□□□ -2.11
CFT2YLR115W YPK3P38070 525 aa1.87□□□□□ -2.11
CFT2YLR115W PFF1P38244 976 aa1.87□□□□□ -2.11
CFT2YLR115W MNL1P38888 796 aa1.87□□□□□ -2.11
CFT2YLR115W ALG5P40350 334 aa1.87□□□□□ -2.11
CFT2YLR115W MET28P40573 187 aa1.87□□□□□ -2.11
CFT2YLR115W BNA6P43619 295 aa1.87□□□□□ -2.11
CFT2YLR115W PET130P47065 347 aa1.87□□□□□ -2.11
CFT2YLR115W ABM1P47146 123 aa1.87□□□□□ -2.11
CFT2YLR115W LIF1P53150 421 aa1.87□□□□□ -2.11
CFT2YLR115W PNC1P53184 216 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W YNL146WP53906 100 aa1.87□□□□□ -2.11
CFT2YLR115W YNL143CP53908 130 aa1.87□□□□□ -2.11
CFT2YLR115W PFA5Q03289 374 aa1.87□□□□□ -2.11
CFT2YLR115W EKI1Q03764 534 aa1.87□□□□□ -2.11
CFT2YLR115W YMR130WQ04223 302 aa1.87□□□□□ -2.11
CFT2YLR115W SCW10Q04951 389 aa1.87□□□□□ -2.11
CFT2YLR115W MSC3Q05812 728 aa1.87□□□□□ -2.11
CFT2YLR115W FMP40Q08968 688 aaPredicted RBP1.87□□□□□ -2.11
CFT2YLR115W VIK1Q12045 647 aa1.87□□□□□ -2.11
CFT2YLR115W YPT6Q99260 215 aa1.87□□□□□ -2.11
CFT2YLR115W TUS1Q06412 1307 aa1.87□□□□□ -2.11
CFT2YLR115W STE3P06783 470 aa1.87□□□□□ -2.11
CFT2YLR115W PDA1P16387 420 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W SAR1P20606 190 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W SAC1P32368 623 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W RAD24P32641 659 aa1.87□□□□□ -2.11
CFT2YLR115W YME1P32795 747 aa1.87□□□□□ -2.11
CFT2YLR115W YHR045WP38775 560 aa1.87□□□□□ -2.11
CFT2YLR115W YHR182WP38870 785 aa1.87□□□□□ -2.11
CFT2YLR115W SEC31P38968 1273 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W ECM10P39987 644 aa1.87□□□□□ -2.11
CFT2YLR115W IAH1P41734 238 aa1.87□□□□□ -2.11
CFT2YLR115W BRO1P48582 844 aa1.87□□□□□ -2.11
CFT2YLR115W FMS1P50264 508 aa1.87□□□□□ -2.11
CFT2YLR115W MND1P53102 219 aa1.87□□□□□ -2.11
CFT2YLR115W VOA1P53262 265 aa1.87□□□□□ -2.11
CFT2YLR115W YGR126WP53274 230 aa1.87□□□□□ -2.11
CFT2YLR115W RTC4P53850 401 aa1.87□□□□□ -2.11
CFT2YLR115W YNL134CP53912 376 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W INA17Q02888 182 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms