RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C RQC1Q05468 723 aaKnown RBP3.94□□□□□ -1.78
SED5YLR026C SNX3Q08826 162 aaKnown RBP3.94□□□□□ -1.78
SED5YLR026C MED1Q12321 566 aa3.94□□□□□ -1.78
SED5YLR026C WTM1Q12363 437 aaKnown RBP3.94□□□□□ -1.78
SED5YLR026C RPL3P14126 387 aaKnown RBP3.93□□□□□ -1.78
SED5YLR026C PCL1P24867 279 aa3.93□□□□□ -1.78
SED5YLR026C PRS1P32895 427 aaKnown RBP3.93□□□□□ -1.78
SED5YLR026C SWE1P32944 819 aa3.93□□□□□ -1.78
SED5YLR026C ARF3P40994 183 aaRIP-Chip data3.93□□□□□ -1.78not detected
SED5YLR026C VTC2P43585 828 aa3.93□□□□□ -1.78
SED5YLR026C YMR027WQ04371 470 aa3.93□□□□□ -1.78
SED5YLR026C PSK1P31374 1356 aa3.92□□□□□ -1.78
SED5YLR026C ROM2P51862 1356 aaKnown RBP3.92□□□□□ -1.78
SED5YLR026C MET17P06106 444 aa3.92□□□□□ -1.78
SED5YLR026C NAT1P12945 854 aaKnown RBP3.92□□□□□ -1.78
SED5YLR026C HXT3P32466 567 aaKnown RBP3.92□□□□□ -1.78
SED5YLR026C SAS2P40963 338 aa3.92□□□□□ -1.78
SED5YLR026C YMR181CQ03231 154 aa3.92□□□□□ -1.78
SED5YLR026C SYF1Q04048 859 aaPredicted RBP3.92□□□□□ -1.78
SED5YLR026C RAD9P14737 1309 aa3.92□□□□□ -1.78
SED5YLR026C HIS4P00815 799 aaKnown RBP3.91□□□□□ -1.78
SED5YLR026C TOP1P04786 769 aa3.91□□□□□ -1.78
SED5YLR026C SNF2P22082 1703 aa3.91□□□□□ -1.78
SED5YLR026C MRPL10P36520 322 aa3.91□□□□□ -1.78
SED5YLR026C VHC1P38329 1120 aa3.91□□□□□ -1.78
SED5YLR026C YHR131CP38835 850 aa3.91□□□□□ -1.78
SED5YLR026C LYS1P38998 373 aaRIP-Chip data3.91□□□□□ -1.78 RIP-Chip
SED5YLR026C YNR048WP53740 393 aa3.91□□□□□ -1.78
SED5YLR026C GIR2Q03768 265 aaPredicted RBP3.91□□□□□ -1.78
SED5YLR026C YDL121CQ07541 149 aa3.91□□□□□ -1.78
SED5YLR026C SIL1Q08199 421 aa3.91□□□□□ -1.78
SED5YLR026C FDH1Q08911 376 aa3.91□□□□□ -1.78
SED5YLR026C GRX6Q12438 231 aa3.91□□□□□ -1.78
SED5YLR026C YRF1-3P0CX14 1859 aa3.9□□□□□ -1.78
SED5YLR026C YRF1-7P0CX15 1859 aa3.9□□□□□ -1.78
SED5YLR026C YRF1-6P53819 1859 aa3.9□□□□□ -1.78
SED5YLR026C TEF1P02994 458 aaKnown RBP3.9□□□□□ -1.79
SED5YLR026C CYC3P06182 269 aa3.9□□□□□ -1.79
SED5YLR026C RIP1P08067 215 aa3.9□□□□□ -1.79
SED5YLR026C SMF1P38925 575 aa3.9□□□□□ -1.79
SED5YLR026C ESL1P40456 1118 aa3.9□□□□□ -1.79
SED5YLR026C SSU1P41930 458 aa3.9□□□□□ -1.79
SED5YLR026C HAL1Q01766 294 aa3.9□□□□□ -1.79
SED5YLR026C RSN1Q03516 953 aa3.9□□□□□ -1.79
SED5YLR026C ARG4P04076 463 aaPredicted RBP3.89□□□□□ -1.79
SED5YLR026C GPH1P06738 902 aaKnown RBP3.89□□□□□ -1.79
SED5YLR026C SEC63P14906 663 aa3.89□□□□□ -1.79
SED5YLR026C MUD1P32605 298 aaKnown RBP3.89□□□□□ -1.79
SED5YLR026C ORT1Q12375 292 aa3.89□□□□□ -1.79
SED5YLR026C KKQ8P36004 724 aa3.88□□□□□ -1.79
SED5YLR026C YHR054CP38780 354 aa3.88□□□□□ -1.79
SED5YLR026C HMS2P47175 358 aa3.88□□□□□ -1.79
SED5YLR026C BRO1P48582 844 aa3.88□□□□□ -1.79
SED5YLR026C MDG1P53885 366 aa3.88□□□□□ -1.79
SED5YLR026C RRI2Q12348 645 aa3.88□□□□□ -1.79
SED5YLR026C RIM15P43565 1770 aa3.87□□□□□ -1.79
SED5YLR026C TSA2Q04120 196 aa3.87□□□□□ -1.79
SED5YLR026C RSF2P46974 1380 aa3.87□□□□□ -1.79
SED5YLR026C APC1P53886 1748 aa3.87□□□□□ -1.79
SED5YLR026C ILV5P06168 395 aaKnown RBP3.86□□□□□ -1.79
SED5YLR026C CKA1P15790 372 aa3.86□□□□□ -1.79
SED5YLR026C SNT1P25357 1226 aa3.86□□□□□ -1.79
SED5YLR026C LSB5P25369 354 aa3.86□□□□□ -1.79
SED5YLR026C POP5P28005 173 aa3.86□□□□□ -1.79
SED5YLR026C OTU2P38747 307 aaKnown RBP3.86□□□□□ -1.79
SED5YLR026C BET5Q03630 159 aa3.86□□□□□ -1.79
SED5YLR026C SPT7P35177 1332 aa3.86□□□□□ -1.79
SED5YLR026C MRP7P12687 371 aa3.85□□□□□ -1.79
SED5YLR026C ROX1P25042 368 aa3.85□□□□□ -1.79
SED5YLR026C IRC6P43615 237 aa3.85□□□□□ -1.79
SED5YLR026C PHB2P50085 310 aa3.85□□□□□ -1.79
SED5YLR026C MNP1P53163 194 aaPredicted RBP3.85□□□□□ -1.79
SED5YLR026C REX4Q08237 289 aa3.85□□□□□ -1.79
SED5YLR026C SGT1Q08446 395 aa3.85□□□□□ -1.79
SED5YLR026C YRM1Q12340 786 aa3.85□□□□□ -1.79
SED5YLR026C RTP1Q12751 981 aa3.85□□□□□ -1.79
SED5YLR026C YRF1-4O13559 1382 aa3.85□□□□□ -1.79
SED5YLR026C CSE2P33308 149 aa3.84□□□□□ -1.79
SED5YLR026C RFC3P38629 340 aa3.84□□□□□ -1.79
SED5YLR026C RPS0BP46654 252 aaKnown RBP3.84□□□□□ -1.79
SED5YLR026C YJR011CP47086 261 aaPredicted RBP3.84□□□□□ -1.79
SED5YLR026C EAF6P47128 113 aa3.84□□□□□ -1.79
SED5YLR026C AZR1P50080 613 aa3.84□□□□□ -1.79
SED5YLR026C RPA49Q01080 415 aaPredicted RBP3.84□□□□□ -1.79
SED5YLR026C MDM30Q05930 598 aa3.84□□□□□ -1.79
SED5YLR026C VTA1Q06263 330 aa3.84□□□□□ -1.79
SED5YLR026C IRC25Q07951 179 aa3.84□□□□□ -1.79
SED5YLR026C YDL012CQ12489 107 aa3.84□□□□□ -1.79
SED5YLR026C RMD5Q12508 421 aa3.84□□□□□ -1.79
SED5YLR026C YOL159C-AQ3E769 90 aa3.84□□□□□ -1.79
SED5YLR026C SIN4P32259 974 aa3.83□□□□□ -1.8
SED5YLR026C KAR9P32526 644 aa3.83□□□□□ -1.8
SED5YLR026C UTP9P38882 575 aaKnown RBP3.83□□□□□ -1.8
SED5YLR026C AHC1Q12433 566 aa3.83□□□□□ -1.8
SED5YLR026C YIL177CP40434 1758 aa3.83□□□□□ -1.8
SED5YLR026C YJL225CP40889 1758 aa3.83□□□□□ -1.8
SED5YLR026C RAD57P25301 460 aa3.82□□□□□ -1.8
SED5YLR026C SAS3P34218 831 aa3.82□□□□□ -1.8
SED5YLR026C ARA1P38115 344 aa3.82□□□□□ -1.8
SED5YLR026C DLD2P46681 530 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms