RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W LSM3P57743 89 aaKnown RBP4.82□□□□□ -1.64
LDB18YLL049W PFA5Q03289 374 aa4.82□□□□□ -1.64
LDB18YLL049W PLB2Q03674 706 aa4.82□□□□□ -1.64
LDB18YLL049W MUS81Q04149 632 aaPredicted RBP4.82□□□□□ -1.64
LDB18YLL049W YOR378WQ08902 515 aa4.82□□□□□ -1.64
LDB18YLL049W YPL245WQ12179 454 aaKnown RBP4.82□□□□□ -1.64
LDB18YLL049W UBX3Q12229 455 aa4.82□□□□□ -1.64
LDB18YLL049W PRP46Q12417 451 aaPredicted RBP4.82□□□□□ -1.64
LDB18YLL049W YPR064WQ12492 139 aa4.82□□□□□ -1.64
LDB18YLL049W ARD1P07347 238 aaPredicted RBP4.81□□□□□ -1.64
LDB18YLL049W YSF3P0C074 85 aaPredicted RBP4.81□□□□□ -1.64
LDB18YLL049W AAD3P25612 363 aa4.81□□□□□ -1.64
LDB18YLL049W PCL2P25693 308 aa4.81□□□□□ -1.64
LDB18YLL049W URA7P28274 579 aaKnown RBP4.81□□□□□ -1.64
LDB18YLL049W REC104P33323 182 aa4.81□□□□□ -1.64
LDB18YLL049W MTC2P34246 357 aa4.81□□□□□ -1.64
LDB18YLL049W SNU114P36048 1008 aaKnown RBP4.81□□□□□ -1.64
LDB18YLL049W CBP4P37267 147 aa4.81□□□□□ -1.64
LDB18YLL049W POP4P38336 279 aa4.81□□□□□ -1.64
LDB18YLL049W NAB3P38996 802 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64 RIP-Chip
LDB18YLL049W YMR144WP40214 342 aaKnown RBP4.81□□□□□ -1.64
LDB18YLL049W CAB2P40506 365 aa4.81□□□□□ -1.64
LDB18YLL049W BUD32P53323 261 aa4.81□□□□□ -1.64
LDB18YLL049W GIP3Q03016 1276 aa4.81□□□□□ -1.64
LDB18YLL049W RQC1Q05468 723 aaKnown RBP4.81□□□□□ -1.64
LDB18YLL049W PDR8Q06149 701 aa4.81□□□□□ -1.64
LDB18YLL049W ACM1Q08981 209 aa4.81□□□□□ -1.64
LDB18YLL049W YOR223WQ12015 292 aa4.81□□□□□ -1.64
LDB18YLL049W APL4Q12028 832 aa4.81□□□□□ -1.64
LDB18YLL049W RUP1Q12242 671 aa4.81□□□□□ -1.64
LDB18YLL049W GPM1P00950 247 aaKnown RBP4.8□□□□□ -1.64
LDB18YLL049W ATP4P05626 244 aa4.8□□□□□ -1.64
LDB18YLL049W YFR010W-AP0C5N0 62 aa4.8□□□□□ -1.64
LDB18YLL049W YML002WP0CF17 737 aa4.8□□□□□ -1.64
LDB18YLL049W PTR2P32901 601 aa4.8□□□□□ -1.64
LDB18YLL049W LOT5P34234 306 aa4.8□□□□□ -1.64
LDB18YLL049W NNK1P36003 928 aa4.8□□□□□ -1.64
LDB18YLL049W ALG14P38242 237 aa4.8□□□□□ -1.64
LDB18YLL049W CAF16P43569 289 aa4.8□□□□□ -1.64
LDB18YLL049W GCD14P46959 383 aaPredicted RBP4.8□□□□□ -1.64
LDB18YLL049W ALB1P47019 175 aaPredicted RBP4.8□□□□□ -1.64
LDB18YLL049W PGU1P47180 361 aa4.8□□□□□ -1.64
LDB18YLL049W EFR3Q03653 782 aaKnown RBP4.8□□□□□ -1.64
LDB18YLL049W GIS1Q03833 894 aa4.8□□□□□ -1.64
LDB18YLL049W API2Q04413 109 aa4.8□□□□□ -1.64
LDB18YLL049W CRN1Q06440 651 aa4.8□□□□□ -1.64
LDB18YLL049W YEH1Q07804 573 aa4.8□□□□□ -1.64
LDB18YLL049W AIM41Q12032 185 aa4.8□□□□□ -1.64
LDB18YLL049W PFK27Q12471 397 aaPredicted RBP4.8□□□□□ -1.64
LDB18YLL049W RPL20AP0CX23 172 aaKnown RBP4.79□□□□□ -1.64
LDB18YLL049W RPL20BP0CX24 172 aaPredicted RBP4.79□□□□□ -1.64
LDB18YLL049W SRV2P17555 526 aaKnown RBP4.79□□□□□ -1.64
LDB18YLL049W SEC14P24280 304 aaKnown RBP4.79□□□□□ -1.64
LDB18YLL049W NPP1P25353 742 aa4.79□□□□□ -1.64
LDB18YLL049W RRP43P25359 394 aaPredicted RBP4.79□□□□□ -1.64
LDB18YLL049W EMP70P32802 667 aa4.79□□□□□ -1.64
LDB18YLL049W STO1P34160 861 aaKnown RBP4.79□□□□□ -1.64
LDB18YLL049W NUP120P35729 1037 aa4.79□□□□□ -1.64
LDB18YLL049W HES1P35843 434 aa4.79□□□□□ -1.64
LDB18YLL049W DTR1P38125 572 aa4.79□□□□□ -1.64
LDB18YLL049W YHL037CP38733 133 aa4.79□□□□□ -1.64
LDB18YLL049W PTH1P38876 190 aaKnown RBP4.79□□□□□ -1.64
LDB18YLL049W HRB1P38922 454 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
LDB18YLL049W SEN34P39707 275 aa4.79□□□□□ -1.64
LDB18YLL049W CIN1P40987 1014 aa4.79□□□□□ -1.64
LDB18YLL049W SAE2P46946 345 aa4.79□□□□□ -1.64
LDB18YLL049W PRY1P47032 299 aa4.79□□□□□ -1.64
LDB18YLL049W YJR141WP47172 347 aaPredicted RBP4.79□□□□□ -1.64
LDB18YLL049W SDT1P53078 280 aa4.79□□□□□ -1.64
LDB18YLL049W SHY1P53266 389 aa4.79□□□□□ -1.64
LDB18YLL049W DAM1P53267 343 aa4.79□□□□□ -1.64
LDB18YLL049W MPA43P53583 542 aaPredicted RBP4.79□□□□□ -1.64
LDB18YLL049W TIM10P87108 93 aa4.79□□□□□ -1.64
LDB18YLL049W YPL107WQ02873 248 aa4.79□□□□□ -1.64
LDB18YLL049W ATP25Q03153 612 aa4.79□□□□□ -1.64
LDB18YLL049W PLM2Q04383 521 aa4.79□□□□□ -1.64
LDB18YLL049W VPS38Q05919 439 aa4.79□□□□□ -1.64
LDB18YLL049W ESA1Q08649 445 aa4.79□□□□□ -1.64
LDB18YLL049W RUD3Q12234 484 aaKnown RBP4.79□□□□□ -1.64
LDB18YLL049W MHT1Q12525 324 aa4.79□□□□□ -1.64
LDB18YLL049W MTR10Q99189 972 aa4.79□□□□□ -1.64
LDB18YLL049W YOS9Q99220 542 aa4.79□□□□□ -1.64
LDB18YLL049W SPT3P06844 337 aa4.78□□□□□ -1.64
LDB18YLL049W GCD2P12754 651 aaPredicted RBP4.78□□□□□ -1.64
LDB18YLL049W GPI12P23797 304 aa4.78□□□□□ -1.64
LDB18YLL049W FUN30P31380 1131 aa4.78□□□□□ -1.64
LDB18YLL049W CBF5P33322 483 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
LDB18YLL049W DOA1P36037 715 aa4.78□□□□□ -1.64
LDB18YLL049W AUR1P36107 401 aaPredicted RBP4.78□□□□□ -1.64
LDB18YLL049W MRPL10P36520 322 aa4.78□□□□□ -1.64
LDB18YLL049W BNA4P38169 460 aa4.78□□□□□ -1.64
LDB18YLL049W PZF1P39933 429 aa4.78□□□□□ -1.64
LDB18YLL049W HOS4P40480 1083 aa4.78□□□□□ -1.64
LDB18YLL049W SEC28P40509 296 aaKnown RBP4.78□□□□□ -1.64
LDB18YLL049W YIL067CP40514 678 aa4.78□□□□□ -1.64
LDB18YLL049W YJR096WP47137 282 aa4.78□□□□□ -1.64
LDB18YLL049W ATP22P50273 684 aaPredicted RBP4.78□□□□□ -1.64
LDB18YLL049W MIX14Q04341 121 aa4.78□□□□□ -1.64
LDB18YLL049W RNH1Q04740 348 aa4.78□□□□□ -1.64
LDB18YLL049W TAD3Q9URQ3 322 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms