RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C FMS1P50264 508 aa1.51□□□□□ -2.17
RPL40BYKR094C RMD9P53140 646 aaKnown RBP1.51□□□□□ -2.17
RPL40BYKR094C ADA2Q02336 434 aa1.51□□□□□ -2.17
RPL40BYKR094C KAP120Q02932 1032 aa1.51□□□□□ -2.17
RPL40BYKR094C GYL1Q04322 720 aa1.51□□□□□ -2.17
RPL40BYKR094C ERB1Q04660 807 aaKnown RBP1.51□□□□□ -2.17
RPL40BYKR094C RRP45Q05636 305 aaKnown RBP1.51□□□□□ -2.17
RPL40BYKR094C YDL007C-AQ2V2Q0 85 aa1.51□□□□□ -2.17
RPL40BYKR094C RPL31BP0C2H9 113 aaKnown RBP1.5□□□□□ -2.17
RPL40BYKR094C NAM2P11325 894 aa1.5□□□□□ -2.17
RPL40BYKR094C MDH1P17505 334 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
RPL40BYKR094C OPI1P21957 404 aa1.5□□□□□ -2.17
RPL40BYKR094C PPH22P23595 377 aa1.5□□□□□ -2.17
RPL40BYKR094C PRD1P25375 712 aa1.5□□□□□ -2.17
RPL40BYKR094C ADK2P26364 225 aa1.5□□□□□ -2.17
RPL40BYKR094C IDH2P28241 369 aaKnown RBP1.5□□□□□ -2.17
RPL40BYKR094C RAD14P28519 371 aa1.5□□□□□ -2.17
RPL40BYKR094C AFG1P32317 509 aa1.5□□□□□ -2.17
RPL40BYKR094C CYS4P32582 507 aaKnown RBP1.5□□□□□ -2.17
RPL40BYKR094C MDL1P33310 695 aa1.5□□□□□ -2.17
RPL40BYKR094C NIP100P33420 868 aa1.5□□□□□ -2.17
RPL40BYKR094C SEC66P33754 206 aa1.5□□□□□ -2.17
RPL40BYKR094C DTR1P38125 572 aa1.5□□□□□ -2.17
RPL40BYKR094C MMS4P38257 691 aa1.5□□□□□ -2.17
RPL40BYKR094C BUD27P43573 796 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
RPL40BYKR094C PGU1P47180 361 aa1.5□□□□□ -2.17
RPL40BYKR094C YGL138CP53122 345 aa1.5□□□□□ -2.17
RPL40BYKR094C ROY1Q04847 553 aa1.5□□□□□ -2.17
RPL40BYKR094C DON1Q05610 365 aa1.5□□□□□ -2.17
RPL40BYKR094C VPS54Q12071 889 aa1.5□□□□□ -2.17
RPL40BYKR094C HSP42Q12329 375 aa1.5□□□□□ -2.17
RPL40BYKR094C SNU66Q12420 587 aaPredicted RBP1.5□□□□□ -2.17
RPL40BYKR094C PGA3Q12746 312 aaKnown RBP1.5□□□□□ -2.17
RPL40BYKR094C YOL159C-AQ3E769 90 aa1.5□□□□□ -2.17
RPL40BYKR094C HSP82P02829 709 aaKnown RBP1.49□□□□□ -2.17
RPL40BYKR094C RHO2P06781 192 aa1.49□□□□□ -2.17
RPL40BYKR094C CBP6P07253 162 aaPredicted RBP1.49□□□□□ -2.17
RPL40BYKR094C CPR2P23285 205 aa1.49□□□□□ -2.17
RPL40BYKR094C AAT2P23542 418 aaKnown RBP1.49□□□□□ -2.17
RPL40BYKR094C SPB1P25582 841 aaPredicted RBP1.49□□□□□ -2.17
RPL40BYKR094C BRF1P29056 596 aa1.49□□□□□ -2.17
RPL40BYKR094C HXT3P32466 567 aaKnown RBP1.49□□□□□ -2.17
RPL40BYKR094C VPH1P32563 840 aaKnown RBP1.49□□□□□ -2.17
RPL40BYKR094C IME2P32581 645 aa1.49□□□□□ -2.17
RPL40BYKR094C YME2P32843 850 aa1.49□□□□□ -2.17
RPL40BYKR094C RRP1P35178 278 aaPredicted RBP1.49□□□□□ -2.17
RPL40BYKR094C LRP1P38801 184 aaKnown RBP1.49□□□□□ -2.17
RPL40BYKR094C LCB2P40970 561 aa1.49□□□□□ -2.17
RPL40BYKR094C CAK1P43568 368 aaPredicted RBP1.49□□□□□ -2.17
RPL40BYKR094C YGR149WP48236 432 aa1.49□□□□□ -2.17
RPL40BYKR094C FRE4P53746 719 aa1.49□□□□□ -2.17
RPL40BYKR094C KTR5P53966 522 aaPredicted RBP1.49□□□□□ -2.17
RPL40BYKR094C HOT1Q03213 719 aa1.49□□□□□ -2.17
RPL40BYKR094C DCI1Q08558 271 aa1.49□□□□□ -2.17
RPL40BYKR094C MED2Q12124 431 aa1.49□□□□□ -2.17
RPL40BYKR094C YLR278CQ05854 1341 aa1.48□□□□□ -2.17
RPL40BYKR094C GPH1P06738 902 aaKnown RBP1.48□□□□□ -2.17
RPL40BYKR094C PDE2P06776 526 aa1.48□□□□□ -2.17
RPL40BYKR094C MAS2P11914 482 aa1.48□□□□□ -2.17
RPL40BYKR094C URA4P20051 364 aa1.48□□□□□ -2.17
RPL40BYKR094C VHC1P38329 1120 aa1.48□□□□□ -2.17
RPL40BYKR094C YHR054CP38780 354 aa1.48□□□□□ -2.17
RPL40BYKR094C BAT1P38891 393 aaKnown RBP1.48□□□□□ -2.17
RPL40BYKR094C MDE1P47095 244 aa1.48□□□□□ -2.17
RPL40BYKR094C COS5P47187 383 aa1.48□□□□□ -2.17
RPL40BYKR094C YGL108CP53139 140 aa1.48□□□□□ -2.17
RPL40BYKR094C YGR111WP53265 400 aa1.48□□□□□ -2.17
RPL40BYKR094C YGR250CP53316 781 aaKnown RBP1.48□□□□□ -2.17
RPL40BYKR094C DSL1P53847 754 aa1.48□□□□□ -2.17
RPL40BYKR094C BNI5P53890 448 aaKnown RBP1.48□□□□□ -2.17
RPL40BYKR094C RPA49Q01080 415 aaPredicted RBP1.48□□□□□ -2.17
RPL40BYKR094C SKO1Q02100 647 aa1.48□□□□□ -2.17
RPL40BYKR094C OAZ1Q02803 292 aa1.48□□□□□ -2.17
RPL40BYKR094C ARX1Q03862 593 aaKnown RBP1.48□□□□□ -2.17
RPL40BYKR094C YDR131CQ03899 556 aa1.48□□□□□ -2.17
RPL40BYKR094C YMR130WQ04223 302 aa1.48□□□□□ -2.17
RPL40BYKR094C COS7Q07788 383 aa1.48□□□□□ -2.17
RPL40BYKR094C SIL1Q08199 421 aa1.48□□□□□ -2.17
RPL40BYKR094C AEP3Q12089 606 aa1.48□□□□□ -2.17
RPL40BYKR094C GPM3Q12326 303 aa1.48□□□□□ -2.17
RPL40BYKR094C RAX2Q12465 1220 aa1.48□□□□□ -2.17
RPL40BYKR094C PAR32Q12515 295 aaKnown RBP1.48□□□□□ -2.17
RPL40BYKR094C TEF1P02994 458 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C RPL6BP05739 176 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C ATP10P18496 279 aa1.47□□□□□ -2.17
RPL40BYKR094C ERV1P27882 189 aa1.47□□□□□ -2.17
RPL40BYKR094C URA7P28274 579 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C DPH2P32461 534 aa1.47□□□□□ -2.17
RPL40BYKR094C ECM25P32525 599 aa1.47□□□□□ -2.17
RPL40BYKR094C GYP6P32806 458 aa1.47□□□□□ -2.17
RPL40BYKR094C LTV1P34078 463 aa1.47□□□□□ -2.17
RPL40BYKR094C RXT2P38255 430 aa1.47□□□□□ -2.17
RPL40BYKR094C APE4P38821 490 aa1.47□□□□□ -2.17
RPL40BYKR094C SEC28P40509 296 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C RPS0BP46654 252 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C YNR048WP53740 393 aa1.47□□□□□ -2.17
RPL40BYKR094C NCS2P53923 493 aaPredicted RBP1.47□□□□□ -2.17
RPL40BYKR094C EOS1P53938 366 aa1.47□□□□□ -2.17
RPL40BYKR094C RPL6AQ02326 176 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C YLR345WQ06137 509 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms