RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C PUG1P40100 303 aa3.88□□□□□ -1.79
SRP40YKR092C ASG1P40467 964 aa3.88□□□□□ -1.79
SRP40YKR092C HPM1P40481 377 aa3.88□□□□□ -1.79
SRP40YKR092C FMC1P40491 155 aa3.88□□□□□ -1.79
SRP40YKR092C NET1P47035 1189 aa3.88□□□□□ -1.79
SRP40YKR092C YJR141WP47172 347 aaPredicted RBP3.88□□□□□ -1.79
SRP40YKR092C RBL2P48606 106 aaKnown RBP3.88□□□□□ -1.79
SRP40YKR092C MAL13P53338 473 aa3.88□□□□□ -1.79
SRP40YKR092C RCF2P53721 224 aa3.88□□□□□ -1.79
SRP40YKR092C CBK1P53894 756 aa3.88□□□□□ -1.79
SRP40YKR092C TIM10P87108 93 aa3.88□□□□□ -1.79
SRP40YKR092C CWC27Q02770 301 aa3.88□□□□□ -1.79
SRP40YKR092C UBP16Q02863 499 aa3.88□□□□□ -1.79
SRP40YKR092C RCO1Q04779 684 aa3.88□□□□□ -1.79
SRP40YKR092C DXO1Q06349 442 aa3.88□□□□□ -1.79
SRP40YKR092C LUC7Q07508 261 aaPredicted RBP3.88□□□□□ -1.79
SRP40YKR092C RPN5Q12250 445 aaKnown RBP3.88□□□□□ -1.79
SRP40YKR092C SNU23Q12368 194 aaPredicted RBP3.88□□□□□ -1.79
SRP40YKR092C NCA2Q12374 616 aa3.88□□□□□ -1.79
SRP40YKR092C SKM1Q12469 655 aa3.88□□□□□ -1.79
SRP40YKR092C PCD1Q12524 340 aa3.88□□□□□ -1.79
SRP40YKR092C AI5_ALPHAQ9ZZX1 630 aa3.88□□□□□ -1.79
SRP40YKR092C IPP1P00817 287 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C GCN4P03069 281 aa3.87□□□□□ -1.79
SRP40YKR092C ARG80P07249 177 aa3.87□□□□□ -1.79
SRP40YKR092C UNG1P12887 359 aa3.87□□□□□ -1.79
SRP40YKR092C RPO26P20435 155 aa3.87□□□□□ -1.79
SRP40YKR092C AMD2P22580 549 aa3.87□□□□□ -1.79
SRP40YKR092C RHB1P25378 209 aa3.87□□□□□ -1.79
SRP40YKR092C ARP2P32381 391 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C GDA1P32621 518 aa3.87□□□□□ -1.79
SRP40YKR092C CYM1P32898 989 aa3.87□□□□□ -1.79
SRP40YKR092C SLC1P33333 303 aa3.87□□□□□ -1.79
SRP40YKR092C MRX3P38172 270 aa3.87□□□□□ -1.79
SRP40YKR092C CCT4P39078 528 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C AIM2P39721 246 aa3.87□□□□□ -1.79
SRP40YKR092C SEC72P39742 193 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C ICE2P40499 491 aa3.87□□□□□ -1.79
SRP40YKR092C TDA10P42938 290 aa3.87□□□□□ -1.79
SRP40YKR092C FET5P43561 622 aa3.87□□□□□ -1.79
SRP40YKR092C TAX4P47030 604 aa3.87□□□□□ -1.79
SRP40YKR092C YJL043WP47053 257 aa3.87□□□□□ -1.79
SRP40YKR092C EMC2P47133 292 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C IMD4P50094 524 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C IMA1P53051 589 aa3.87□□□□□ -1.79
SRP40YKR092C ART5P53244 586 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C NOP13P53883 403 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SRP40YKR092C DIA1P54005 336 aa3.87□□□□□ -1.79
SRP40YKR092C ADE16P54113 591 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C YKR005CQ02203 525 aa3.87□□□□□ -1.79
SRP40YKR092C NUP116Q02630 1113 aa3.87□□□□□ -1.79
SRP40YKR092C CTF19Q02732 369 aa3.87□□□□□ -1.79
SRP40YKR092C PET117Q02771 107 aa3.87□□□□□ -1.79
SRP40YKR092C SWP1Q02795 286 aa3.87□□□□□ -1.79
SRP40YKR092C YMD8Q03697 442 aa3.87□□□□□ -1.79
SRP40YKR092C SNX41Q04053 625 aa3.87□□□□□ -1.79
SRP40YKR092C YMR226CQ05016 267 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C VTA1Q06263 330 aa3.87□□□□□ -1.79
SRP40YKR092C YPR147CQ06522 304 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C ATG23Q06671 453 aa3.87□□□□□ -1.79
SRP40YKR092C SDO1Q07953 250 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C GPN2Q08726 347 aaPredicted RBP3.87□□□□□ -1.79
SRP40YKR092C FYV7Q12247 151 aa3.87□□□□□ -1.79
SRP40YKR092C GIS3Q12418 502 aa3.87□□□□□ -1.79
SRP40YKR092C RTN2Q12443 393 aa3.87□□□□□ -1.79
SRP40YKR092C ARP6Q12509 438 aa3.87□□□□□ -1.79
SRP40YKR092C RRP12Q12754 1228 aaKnown RBP3.87□□□□□ -1.79
SRP40YKR092C NBL1Q3E7Y6 73 aa3.87□□□□□ -1.79
SRP40YKR092C ISN1Q99312 450 aa3.87□□□□□ -1.79
SRP40YKR092C GAL4P04386 881 aa3.86□□□□□ -1.79
SRP40YKR092C CHO2P05374 869 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C RAD1P06777 1100 aa3.86□□□□□ -1.79
SRP40YKR092C AQY1P0CD91 305 aa3.86□□□□□ -1.79
SRP40YKR092C RPL35AP0CX84 120 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C RPL35BP0CX85 120 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C MDH1P17505 334 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SRP40YKR092C PHO13P19881 312 aa3.86□□□□□ -1.79
SRP40YKR092C OLE1P21147 510 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C IMG1P25626 169 aa3.86□□□□□ -1.79
SRP40YKR092C BUD23P25627 275 aaPredicted RBP3.86□□□□□ -1.79
SRP40YKR092C URA7P28274 579 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C MCM4P30665 933 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C SAC6P32599 642 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C MYO3P36006 1272 aa3.86□□□□□ -1.79
SRP40YKR092C ALY1P36117 915 aa3.86□□□□□ -1.79
SRP40YKR092C APE3P37302 537 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C FIG1P38224 298 aa3.86□□□□□ -1.79
SRP40YKR092C FSH1P38777 243 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C FRT2P39734 528 aa3.86□□□□□ -1.79
SRP40YKR092C RPH1P39956 796 aa3.86□□□□□ -1.79
SRP40YKR092C GVP36P40531 326 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C ERR3P42222 437 aa3.86□□□□□ -1.79
SRP40YKR092C IBA57P47158 497 aa3.86□□□□□ -1.79
SRP40YKR092C YGL204CP53089 101 aa3.86□□□□□ -1.79
SRP40YKR092C CUL3P53202 744 aa3.86□□□□□ -1.79
SRP40YKR092C IMO32P53219 342 aa3.86□□□□□ -1.79
SRP40YKR092C PRM1P53835 661 aa3.86□□□□□ -1.79
SRP40YKR092C RPL6AQ02326 176 aaKnown RBP3.86□□□□□ -1.79
SRP40YKR092C RUB1Q03919 77 aa3.86□□□□□ -1.79
SRP40YKR092C MFB1Q04922 465 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms