RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W FIG1P38224 298 aa4.28□□□□□ -1.72
AVT1YJR001W SEC72P39742 193 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W IME4P41833 600 aa4.28□□□□□ -1.72
AVT1YJR001W TFG2P41896 400 aaPredicted RBP4.28□□□□□ -1.72
AVT1YJR001W CTK2P46962 323 aa4.28□□□□□ -1.72
AVT1YJR001W CTR1P49573 406 aa4.28□□□□□ -1.72
AVT1YJR001W NCE103P53615 221 aa4.28□□□□□ -1.72
AVT1YJR001W DUS1P53759 423 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W MFM1Q02783 413 aa4.28□□□□□ -1.72
AVT1YJR001W YPL108WQ02872 168 aaPredicted RBP4.28□□□□□ -1.72
AVT1YJR001W YDC1Q02896 317 aa4.28□□□□□ -1.72
AVT1YJR001W PRM15Q03262 622 aa4.28□□□□□ -1.72
AVT1YJR001W GCN5Q03330 439 aa4.28□□□□□ -1.72
AVT1YJR001W YMR010WQ03687 405 aa4.28□□□□□ -1.72
AVT1YJR001W RUB1Q03919 77 aa4.28□□□□□ -1.72
AVT1YJR001W BUD22Q04347 519 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W YDL176WQ12027 708 aa4.28□□□□□ -1.72
AVT1YJR001W RSF2P46974 1380 aa4.28□□□□□ -1.72
AVT1YJR001W SPT3P06844 337 aa4.28□□□□□ -1.72
AVT1YJR001W YRF1-3P0CX14 1859 aa4.28□□□□□ -1.72
AVT1YJR001W YRF1-7P0CX15 1859 aa4.28□□□□□ -1.72
AVT1YJR001W SCH9P11792 824 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W AAT2P23542 418 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W RHB1P25378 209 aa4.28□□□□□ -1.72
AVT1YJR001W YIH1P25637 258 aa4.28□□□□□ -1.72
AVT1YJR001W FUN26P31381 517 aa4.28□□□□□ -1.72
AVT1YJR001W SSE2P32590 693 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W CYM1P32898 989 aa4.28□□□□□ -1.72
AVT1YJR001W SUI1P32911 108 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W SPO23P33757 523 aa4.28□□□□□ -1.72
AVT1YJR001W MRPL16P38064 232 aa4.28□□□□□ -1.72
AVT1YJR001W HEK2P38199 381 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
AVT1YJR001W AIM2P39721 246 aa4.28□□□□□ -1.72
AVT1YJR001W DDI1P40087 428 aa4.28□□□□□ -1.72
AVT1YJR001W ERG10P41338 398 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W MAF1P41910 395 aa4.28□□□□□ -1.72
AVT1YJR001W YGR149WP48236 432 aa4.28□□□□□ -1.72
AVT1YJR001W YGR126WP53274 230 aa4.28□□□□□ -1.72
AVT1YJR001W YRF1-6P53819 1859 aa4.28□□□□□ -1.72
AVT1YJR001W SLD5Q03406 294 aa4.28□□□□□ -1.72
AVT1YJR001W YDR248CQ03786 193 aa4.28□□□□□ -1.72
AVT1YJR001W URH1Q04179 340 aa4.28□□□□□ -1.72
AVT1YJR001W ATG23Q06671 453 aa4.28□□□□□ -1.72
AVT1YJR001W DIA2Q08496 732 aaPredicted RBP4.28□□□□□ -1.72
AVT1YJR001W INP53Q12271 1107 aa4.28□□□□□ -1.72
AVT1YJR001W RPN6Q12377 434 aa4.28□□□□□ -1.72
AVT1YJR001W MSF1P08425 469 aa4.27□□□□□ -1.73
AVT1YJR001W MATALPHA1P0CY06 175 aa4.27□□□□□ -1.73
AVT1YJR001W HMLALPHA1P0CY07 175 aa4.27□□□□□ -1.73
AVT1YJR001W RPL4AP10664 362 aaKnown RBP4.27□□□□□ -1.73
AVT1YJR001W GAL3P13045 520 aa4.27□□□□□ -1.73
AVT1YJR001W NSP1P14907 823 aaKnown RBP4.27□□□□□ -1.73
AVT1YJR001W CDC23P16522 626 aa4.27□□□□□ -1.73
AVT1YJR001W CAM1P29547 415 aaKnown RBP4.27□□□□□ -1.73
AVT1YJR001W FES1P38260 290 aa4.27□□□□□ -1.73
AVT1YJR001W AME1P38313 324 aa4.27□□□□□ -1.73
AVT1YJR001W RCK2P38623 610 aa4.27□□□□□ -1.73
AVT1YJR001W SBE22P38814 852 aa4.27□□□□□ -1.73
AVT1YJR001W YAT2P40017 923 aa4.27□□□□□ -1.73
AVT1YJR001W YJL107CP42947 387 aa4.27□□□□□ -1.73
AVT1YJR001W RPL4BP49626 362 aaKnown RBP4.27□□□□□ -1.73
AVT1YJR001W PRP24P49960 444 aaKnown RBP4.27□□□□□ -1.73
AVT1YJR001W SEH1P53011 349 aaKnown RBP4.27□□□□□ -1.73
AVT1YJR001W VOA1P53262 265 aa4.27□□□□□ -1.73
AVT1YJR001W MPS1P54199 764 aa4.27□□□□□ -1.73
AVT1YJR001W CTF19Q02732 369 aa4.27□□□□□ -1.73
AVT1YJR001W MMT1Q03218 510 aa4.27□□□□□ -1.73
AVT1YJR001W RSM24Q03976 319 aa4.27□□□□□ -1.73
AVT1YJR001W ASM4Q05166 528 aa4.27□□□□□ -1.73
AVT1YJR001W RGC1Q06108 1083 aaKnown RBP4.27□□□□□ -1.73
AVT1YJR001W ARG82P07250 355 aa4.26□□□□□ -1.73
AVT1YJR001W AMD2P22580 549 aa4.26□□□□□ -1.73
AVT1YJR001W DBR1P24309 405 aaKnown RBP4.26□□□□□ -1.73
AVT1YJR001W RNA15P25299 296 aaPredicted RBP4.26□□□□□ -1.73
AVT1YJR001W CPR4P25334 318 aa4.26□□□□□ -1.73
AVT1YJR001W ADY2P25613 283 aa4.26□□□□□ -1.73
AVT1YJR001W PRE2P30656 287 aaKnown RBP4.26□□□□□ -1.73
AVT1YJR001W GCD7P32502 381 aaPredicted RBP4.26□□□□□ -1.73
AVT1YJR001W PTK1P36002 662 aaPredicted RBP4.26□□□□□ -1.73
AVT1YJR001W VPS21P36017 210 aaKnown RBP4.26□□□□□ -1.73
AVT1YJR001W TOS1P38288 455 aa4.26□□□□□ -1.73
AVT1YJR001W STB5P38699 743 aa4.26□□□□□ -1.73
AVT1YJR001W MSS4P38994 779 aa4.26□□□□□ -1.73
AVT1YJR001W CIN1P40987 1014 aa4.26□□□□□ -1.73
AVT1YJR001W FKH2P41813 862 aa4.26□□□□□ -1.73
AVT1YJR001W AGP3P43548 558 aa4.26□□□□□ -1.73
AVT1YJR001W NMD5P46970 1048 aa4.26□□□□□ -1.73
AVT1YJR001W RTT101P47050 842 aa4.26□□□□□ -1.73
AVT1YJR001W LSM8P47093 109 aaKnown RBP4.26□□□□□ -1.73
AVT1YJR001W YJR111CP47148 283 aaKnown RBP4.26□□□□□ -1.73
AVT1YJR001W CLA4P48562 842 aa4.26□□□□□ -1.73
AVT1YJR001W RIB4P50861 169 aaPredicted RBP4.26□□□□□ -1.73
AVT1YJR001W PUS2P53167 370 aa4.26□□□□□ -1.73
AVT1YJR001W SKO1Q02100 647 aa4.26□□□□□ -1.73
AVT1YJR001W CWC27Q02770 301 aa4.26□□□□□ -1.73
AVT1YJR001W FRE3Q08905 711 aa4.26□□□□□ -1.73
AVT1YJR001W TAF10Q12030 206 aa4.26□□□□□ -1.73
AVT1YJR001W RLM1Q12224 676 aa4.26□□□□□ -1.73
AVT1YJR001W NCA2Q12374 616 aa4.26□□□□□ -1.73
AVT1YJR001W COQ4O13525 335 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms