RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C AVT5P38176 459 aa3.11□□□□□ -1.91
ATG27YJL178C NAB3P38996 802 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91 RIP-Chip
ATG27YJL178C HAT2P39984 401 aa3.11□□□□□ -1.91
ATG27YJL178C SHO1P40073 367 aa3.11□□□□□ -1.91
ATG27YJL178C ALG8P40351 577 aa3.11□□□□□ -1.91
ATG27YJL178C SYG1P40528 902 aa3.11□□□□□ -1.91
ATG27YJL178C POP1P41812 875 aa3.11□□□□□ -1.91
ATG27YJL178C GPD2P41911 440 aaKnown RBP3.11□□□□□ -1.91
ATG27YJL178C IDP2P41939 412 aa3.11□□□□□ -1.91
ATG27YJL178C LSB1P53281 241 aa3.11□□□□□ -1.91
ATG27YJL178C TOF1P53840 1238 aa3.11□□□□□ -1.91
ATG27YJL178C JJJ1P53863 590 aa3.11□□□□□ -1.91
ATG27YJL178C IRC15Q02733 499 aa3.11□□□□□ -1.91
ATG27YJL178C SOV1Q04748 898 aa3.11□□□□□ -1.91
ATG27YJL178C SML1Q04964 104 aa3.11□□□□□ -1.91
ATG27YJL178C TSR2Q06672 205 aaKnown RBP3.11□□□□□ -1.91
ATG27YJL178C VAC14Q06708 880 aa3.11□□□□□ -1.91
ATG27YJL178C RSA1Q08932 381 aa3.11□□□□□ -1.91
ATG27YJL178C YLL056CQ12177 298 aa3.11□□□□□ -1.91
ATG27YJL178C RRD2Q12461 358 aa3.11□□□□□ -1.91
ATG27YJL178C YKL068W-AQ3E826 78 aa3.11□□□□□ -1.91
ATG27YJL178C BRR1Q99177 341 aaPredicted RBP3.11□□□□□ -1.91
ATG27YJL178C YLR278CQ05854 1341 aa3.11□□□□□ -1.91
ATG27YJL178C INH1P01097 85 aa3.1□□□□□ -1.91
ATG27YJL178C RPC53P25441 422 aa3.1□□□□□ -1.91
ATG27YJL178C FUN19P28003 413 aaPredicted RBP3.1□□□□□ -1.91
ATG27YJL178C CMC1P36064 111 aa3.1□□□□□ -1.91
ATG27YJL178C TUL1P36096 758 aa3.1□□□□□ -1.91
ATG27YJL178C SDS24P38314 527 aa3.1□□□□□ -1.91
ATG27YJL178C TIF5P38431 405 aaKnown RBP3.1□□□□□ -1.91
ATG27YJL178C CAJ1P39101 391 aa3.1□□□□□ -1.91
ATG27YJL178C WSC2P53832 503 aa3.1□□□□□ -1.91
ATG27YJL178C VPS72Q03388 795 aa3.1□□□□□ -1.91
ATG27YJL178C VPS60Q03390 229 aa3.1□□□□□ -1.91
ATG27YJL178C GYL1Q04322 720 aa3.1□□□□□ -1.91
ATG27YJL178C FUS2Q05670 677 aa3.1□□□□□ -1.91
ATG27YJL178C CLN3P13365 580 aa3.09□□□□□ -1.91
ATG27YJL178C PUT3P25502 979 aaPredicted RBP3.09□□□□□ -1.91
ATG27YJL178C BUB3P26449 341 aa3.09□□□□□ -1.91
ATG27YJL178C CDC60P26637 1090 aaKnown RBP3.09□□□□□ -1.91
ATG27YJL178C TCD1P38756 429 aa3.09□□□□□ -1.91
ATG27YJL178C LCB2P40970 561 aa3.09□□□□□ -1.91
ATG27YJL178C HXT14P42833 540 aa3.09□□□□□ -1.91
ATG27YJL178C ELP2P42935 788 aa3.09□□□□□ -1.91
ATG27YJL178C OCA1P50946 238 aaPredicted RBP3.09□□□□□ -1.91
ATG27YJL178C YGL108CP53139 140 aa3.09□□□□□ -1.91
ATG27YJL178C LIF1P53150 421 aa3.09□□□□□ -1.91
ATG27YJL178C SFH1Q06168 426 aa3.09□□□□□ -1.91
ATG27YJL178C RPO26P20435 155 aa3.08□□□□□ -1.92
ATG27YJL178C PPH22P23595 377 aa3.08□□□□□ -1.92
ATG27YJL178C HXT1P32465 570 aa3.08□□□□□ -1.92
ATG27YJL178C NIP100P33420 868 aa3.08□□□□□ -1.92
ATG27YJL178C JNM1P36224 373 aa3.08□□□□□ -1.92
ATG27YJL178C THI2P38141 450 aa3.08□□□□□ -1.92
ATG27YJL178C PES4P39684 611 aa3.08□□□□□ -1.92
ATG27YJL178C FIS1P40515 155 aa3.08□□□□□ -1.92
ATG27YJL178C YPI1P43587 155 aa3.08□□□□□ -1.92
ATG27YJL178C MIC19P43594 170 aa3.08□□□□□ -1.92
ATG27YJL178C GWT1P47026 490 aa3.08□□□□□ -1.92
ATG27YJL178C URH1Q04179 340 aa3.08□□□□□ -1.92
ATG27YJL178C TAF11Q04226 346 aa3.08□□□□□ -1.92
ATG27YJL178C YMR114CQ04471 368 aaKnown RBP3.08□□□□□ -1.92
ATG27YJL178C YLR297WQ05899 129 aa3.08□□□□□ -1.92
ATG27YJL178C SPH1Q06160 661 aa3.08□□□□□ -1.92
ATG27YJL178C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
ATG27YJL178C CTF3Q12748 733 aa3.08□□□□□ -1.92
ATG27YJL178C YOL159C-AQ3E769 90 aa3.08□□□□□ -1.92
ATG27YJL178C CDC31P06704 161 aaKnown RBP3.07□□□□□ -1.92
ATG27YJL178C PMR1P13586 950 aa3.07□□□□□ -1.92
ATG27YJL178C RED1P14291 827 aa3.07□□□□□ -1.92
ATG27YJL178C ATP10P18496 279 aa3.07□□□□□ -1.92
ATG27YJL178C CKI1P20485 582 aa3.07□□□□□ -1.92
ATG27YJL178C SPB1P25582 841 aaPredicted RBP3.07□□□□□ -1.92
ATG27YJL178C AFG1P32317 509 aa3.07□□□□□ -1.92
ATG27YJL178C SEC66P33754 206 aa3.07□□□□□ -1.92
ATG27YJL178C FRE2P36033 711 aa3.07□□□□□ -1.92
ATG27YJL178C MCR1P36060 302 aaKnown RBP3.07□□□□□ -1.92
ATG27YJL178C PCA1P38360 1216 aa3.07□□□□□ -1.92
ATG27YJL178C FAU1P40099 211 aa3.07□□□□□ -1.92
ATG27YJL178C VMA13P41807 478 aaKnown RBP3.07□□□□□ -1.92
ATG27YJL178C CTK3P46963 296 aaPredicted RBP3.07□□□□□ -1.92
ATG27YJL178C YGR149WP48236 432 aa3.07□□□□□ -1.92
ATG27YJL178C BTN2P53286 410 aa3.07□□□□□ -1.92
ATG27YJL178C MAL13P53338 473 aa3.07□□□□□ -1.92
ATG27YJL178C MSO1P53604 210 aaKnown RBP3.07□□□□□ -1.92
ATG27YJL178C NCS2P53923 493 aaPredicted RBP3.07□□□□□ -1.92
ATG27YJL178C TIM8P57744 87 aa3.07□□□□□ -1.92
ATG27YJL178C ERP3Q12403 225 aa3.07□□□□□ -1.92
ATG27YJL178C RTN2Q12443 393 aa3.07□□□□□ -1.92
ATG27YJL178C RTP1Q12751 981 aa3.07□□□□□ -1.92
ATG27YJL178C RAD1P06777 1100 aa3.06□□□□□ -1.92
ATG27YJL178C RPL3P14126 387 aaKnown RBP3.06□□□□□ -1.92
ATG27YJL178C RNA14P25298 677 aaKnown RBP3.06□□□□□ -1.92
ATG27YJL178C IDH2P28241 369 aaKnown RBP3.06□□□□□ -1.92
ATG27YJL178C RAD14P28519 371 aa3.06□□□□□ -1.92
ATG27YJL178C SRB4P32569 687 aa3.06□□□□□ -1.92
ATG27YJL178C GCG1P32656 232 aaKnown RBP3.06□□□□□ -1.92
ATG27YJL178C YSC83P32792 385 aa3.06□□□□□ -1.92
ATG27YJL178C DBP7P36120 742 aaKnown RBP3.06□□□□□ -1.92
ATG27YJL178C YNL320WP42840 284 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms