RNA–Protein interactions for RNA: YJL052W

TDH1, Transcript of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1, yeast

Gene TDH1, Length 999 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDH1	YJL052W	BUD14	P27637	709 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	IDH2	P28241	369 aa	Known RBP	7.31	□□□□□ -1.24
TDH1	YJL052W	SPO23	P33757	523 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	BNA4	P38169	460 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	HSM3	P38348	480 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	ATG7	P38862	630 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	YAR028W	P39548	234 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	PTI1	P39927	425 aa	Predicted RBP	7.31	□□□□□ -1.24
TDH1	YJL052W	YIL152W	P40455	235 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	YIL001W	P40560	513 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	UBP6	P43593	499 aa	Known RBP	7.31	□□□□□ -1.24
TDH1	YJL052W	IKS1	P47042	667 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	RAD17	P48581	401 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	ELA1	P53861	379 aa	Predicted RBP	7.31	□□□□□ -1.24
TDH1	YJL052W	REX2	P54964	269 aa	Known RBP	7.31	□□□□□ -1.24
TDH1	YJL052W	SHE9	Q04172	456 aa		7.31	□□□□□ -1.24
TDH1	YJL052W	RPN5	Q12250	445 aa	Known RBP	7.31	□□□□□ -1.24
TDH1	YJL052W	COX1	P00401	534 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	SLM5	P25345	492 aa	Known RBP	7.3	□□□□□ -1.24
TDH1	YJL052W	SPB1	P25582	841 aa	Predicted RBP	7.3	□□□□□ -1.24
TDH1	YJL052W	AAR2	P32357	355 aa	Predicted RBP	7.3	□□□□□ -1.24
TDH1	YJL052W	ORC2	P32833	620 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	ATO2	P32907	282 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	COS111	P38308	924 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	MBP1	P39678	833 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	TRS85	P46944	698 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	MTR3	P48240	250 aa	Predicted RBP	7.3	□□□□□ -1.24
TDH1	YJL052W	GOR1	P53839	350 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	SNP1	Q00916	300 aa	Predicted RBP	7.3	□□□□□ -1.24
TDH1	YJL052W	HUA2	Q12134	243 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	RRP36	Q12481	300 aa	Predicted RBP	7.3	□□□□□ -1.24
TDH1	YJL052W	SAS5	Q99314	248 aa		7.3	□□□□□ -1.24
TDH1	YJL052W	GCN1	P33892	2672 aa	Known RBP	7.3	□□□□□ -1.24
TDH1	YJL052W	CAR1	P00812	333 aa	Known RBP	7.29	□□□□□ -1.24
TDH1	YJL052W	MSS116	P15424	664 aa	Known RBP	7.29	□□□□□ -1.24
TDH1	YJL052W	NPP1	P25353	742 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	FAA1	P30624	700 aa	Known RBP	7.29	□□□□□ -1.24
TDH1	YJL052W	ZIP1	P31111	875 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	PMT2	P31382	759 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	COQ2	P32378	372 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	YBL029W	P38201	376 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	YBR062C	P38239	180 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	ARN1	P38731	627 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	SEC26	P41810	973 aa	Known RBP	7.29	□□□□□ -1.24
TDH1	YJL052W	MPS3	P47069	682 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	UPF3	P48412	387 aa	Known RBP	7.29	□□□□□ -1.24
TDH1	YJL052W	GNP1	P48813	663 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	YPL071C	Q02864	156 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	YET2	Q04210	160 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	RQC1	Q05468	723 aa	Known RBP	7.29	□□□□□ -1.24
TDH1	YJL052W	MDM30	Q05930	598 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	YEH2	Q07950	538 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	SLF1	Q12034	447 aa	Known RBP	7.29	□□□□□ -1.24
TDH1	YJL052W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	7.29	□□□□□ -1.24	not detected
TDH1	YJL052W	YPT6	Q99260	215 aa		7.29	□□□□□ -1.24
TDH1	YJL052W	FAS1	P07149	2051 aa	Known RBP	7.28	□□□□□ -1.24
TDH1	YJL052W	ATP4	P05626	244 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	SEC62	P21825	274 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	SYP1	P25623	870 aa	Known RBP	7.28	□□□□□ -1.24
TDH1	YJL052W	LYP1	P32487	611 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	PTC1	P35182	281 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	DOA1	P36037	715 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	MNN2	P38069	597 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	FMP52	P40008	231 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	PTR3	P43606	678 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	STE24	P47154	453 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	RNR4	P49723	345 aa	Known RBP	7.28	□□□□□ -1.24
TDH1	YJL052W	MUP1	P50276	574 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	LGE1	Q02796	332 aa	Known RBP	7.28	□□□□□ -1.24
TDH1	YJL052W	GLO2	Q05584	274 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	VPS74	Q06385	345 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	CDA1	Q06702	301 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	YEH1	Q07804	573 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	AKR2	Q12013	749 aa		7.28	□□□□□ -1.24
TDH1	YJL052W	RAS2	P01120	322 aa	Known RBP	7.27	□□□□□ -1.25
TDH1	YJL052W	ARD1	P07347	238 aa	Predicted RBP	7.27	□□□□□ -1.25
TDH1	YJL052W	CDC34	P14682	295 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	CBS2	P14905	389 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	PRI2	P20457	528 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	DCG1	P32460	244 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	STE14	P32584	239 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	NNK1	P36003	928 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	FRE2	P36033	711 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	GLG1	P36143	616 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	VPS52	P39904	641 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	AYR1	P40471	297 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	PSA1	P41940	361 aa	Known RBP	7.27	□□□□□ -1.25
TDH1	YJL052W	LCL3	P53153	274 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	MSC1	Q03104	513 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	ENT2	Q05785	613 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	SGT1	Q08446	395 aa		7.27	□□□□□ -1.25
TDH1	YJL052W	GLK1	P17709	500 aa	Known RBP	7.26	□□□□□ -1.25
TDH1	YJL052W	RVS161	P25343	265 aa	Known RBP	7.26	□□□□□ -1.25
TDH1	YJL052W	CPR3	P25719	182 aa		7.26	□□□□□ -1.25
TDH1	YJL052W	SSO1	P32867	290 aa		7.26	□□□□□ -1.25
TDH1	YJL052W	ICE2	P40499	491 aa		7.26	□□□□□ -1.25
TDH1	YJL052W	NNF2	P53253	936 aa		7.26	□□□□□ -1.25
TDH1	YJL052W	REC102	Q02721	264 aa		7.26	□□□□□ -1.25
TDH1	YJL052W	RPM2	Q02773	1202 aa		7.26	□□□□□ -1.25
TDH1	YJL052W	OAZ1	Q02803	292 aa		7.26	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms