RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W SCO2P38072 301 aa9.5□□□□□ -0.89
UBA4YHR111W HEK2P38199 381 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
UBA4YHR111W IFA38P38286 347 aa9.5□□□□□ -0.89
UBA4YHR111W YJL043WP47053 257 aa9.5□□□□□ -0.89
UBA4YHR111W YOL131WQ08270 108 aa9.5□□□□□ -0.89
UBA4YHR111W DIA2Q08496 732 aaPredicted RBP9.5□□□□□ -0.89
UBA4YHR111W RPN6Q12377 434 aa9.5□□□□□ -0.89
UBA4YHR111W PNS1Q12412 539 aa9.5□□□□□ -0.89
UBA4YHR111W TRA1P38811 3744 aa9.49□□□□□ -0.89
UBA4YHR111W CDC9P04819 755 aa9.49□□□□□ -0.89
UBA4YHR111W RPB5P20434 215 aa9.49□□□□□ -0.89
UBA4YHR111W TOA1P32773 286 aa9.49□□□□□ -0.89
UBA4YHR111W TRR2P38816 342 aa9.49□□□□□ -0.89
UBA4YHR111W RGI1P40043 161 aaPredicted RBP9.49□□□□□ -0.89
UBA4YHR111W SEC24P40482 926 aaKnown RBP9.49□□□□□ -0.89
UBA4YHR111W LYS12P40495 371 aaKnown RBP9.49□□□□□ -0.89
UBA4YHR111W SNO3P43544 222 aa9.49□□□□□ -0.89
UBA4YHR111W ALB1P47019 175 aaPredicted RBP9.49□□□□□ -0.89
UBA4YHR111W YJR115WP47152 169 aa9.49□□□□□ -0.89
UBA4YHR111W HOS2P53096 452 aaPredicted RBP9.49□□□□□ -0.89
UBA4YHR111W YGR067CP53243 804 aa9.49□□□□□ -0.89
UBA4YHR111W UBP2Q01476 1272 aa9.49□□□□□ -0.89
UBA4YHR111W YPR091CQ06833 770 aa9.49□□□□□ -0.89
UBA4YHR111W YLR036CQ07986 203 aa9.49□□□□□ -0.89
UBA4YHR111W YOR376WQ08900 122 aa9.49□□□□□ -0.89
UBA4YHR111W FDH1Q08911 376 aa9.49□□□□□ -0.89
UBA4YHR111W YPL272CQ08984 517 aa9.49□□□□□ -0.89
UBA4YHR111W RPP2BP02400 110 aaKnown RBP9.48□□□□□ -0.89
UBA4YHR111W RPL7AP05737 244 aaKnown RBP9.48□□□□□ -0.89
UBA4YHR111W CYT1P07143 309 aa9.48□□□□□ -0.89
UBA4YHR111W NUP2P32499 720 aa9.48□□□□□ -0.89
UBA4YHR111W MRX1P40050 688 aa9.48□□□□□ -0.89
UBA4YHR111W YJR141WP47172 347 aaPredicted RBP9.48□□□□□ -0.89
UBA4YHR111W ATP22P50273 684 aaPredicted RBP9.48□□□□□ -0.89
UBA4YHR111W VPS73P53142 486 aaKnown RBP9.48□□□□□ -0.89
UBA4YHR111W YMR310CQ04867 317 aaPredicted RBP9.48□□□□□ -0.89
UBA4YHR111W YPR172WQ06608 200 aa9.48□□□□□ -0.89
UBA4YHR111W CDA2Q06703 312 aa9.48□□□□□ -0.89
UBA4YHR111W YLL007CQ07799 665 aa9.48□□□□□ -0.89
UBA4YHR111W YOR365CQ08844 703 aa9.48□□□□□ -0.89
UBA4YHR111W RPL7BQ12213 244 aaKnown RBP9.48□□□□□ -0.89
UBA4YHR111W SKS1Q12505 502 aa9.48□□□□□ -0.89
UBA4YHR111W ARG3P05150 338 aa9.47□□□□□ -0.89
UBA4YHR111W YSF3P0C074 85 aaPredicted RBP9.47□□□□□ -0.89
UBA4YHR111W GPI12P23797 304 aa9.47□□□□□ -0.89
UBA4YHR111W CUE2P36075 443 aaKnown RBP9.47□□□□□ -0.89
UBA4YHR111W VPS51P36116 164 aa9.47□□□□□ -0.89
UBA4YHR111W FES1P38260 290 aa9.47□□□□□ -0.89
UBA4YHR111W GID8P40208 455 aa9.47□□□□□ -0.89
UBA4YHR111W IMA5P40884 581 aa9.47□□□□□ -0.89
UBA4YHR111W MRPS18P42847 217 aa9.47□□□□□ -0.89
UBA4YHR111W PAC10P48363 199 aa9.47□□□□□ -0.89
UBA4YHR111W USE1P53146 245 aa9.47□□□□□ -0.89
UBA4YHR111W MMT1Q03218 510 aa9.47□□□□□ -0.89
UBA4YHR111W COS7Q07788 383 aa9.47□□□□□ -0.89
UBA4YHR111W MLH3Q12083 715 aa9.47□□□□□ -0.89
UBA4YHR111W NSL1Q12143 216 aa9.47□□□□□ -0.89
UBA4YHR111W PAR32Q12515 295 aaKnown RBP9.47□□□□□ -0.89
UBA4YHR111W TY4B-PA0A0B7P3V8 1104 aa9.46□□□□□ -0.9
UBA4YHR111W ADH7P25377 361 aa9.46□□□□□ -0.9
UBA4YHR111W ROT2P38138 954 aa9.46□□□□□ -0.9
UBA4YHR111W ALG3P38179 458 aa9.46□□□□□ -0.9
UBA4YHR111W TSC10P38342 320 aa9.46□□□□□ -0.9
UBA4YHR111W TIF11P38912 153 aaKnown RBP9.46□□□□□ -0.9
UBA4YHR111W PHB1P40961 287 aa9.46□□□□□ -0.9
UBA4YHR111W UBC9P50623 157 aaPredicted RBP9.46□□□□□ -0.9
UBA4YHR111W ROM1P53046 1155 aa9.46□□□□□ -0.9
UBA4YHR111W SMA2Q04658 369 aa9.46□□□□□ -0.9
UBA4YHR111W SSQ1Q05931 657 aaPredicted RBP9.46□□□□□ -0.9
UBA4YHR111W GPN2Q08726 347 aaPredicted RBP9.46□□□□□ -0.9
UBA4YHR111W YPR202WQ08993 238 aa9.46□□□□□ -0.9
UBA4YHR111W ATP6P00854 259 aa9.45□□□□□ -0.9
UBA4YHR111W TPK2P06245 380 aa9.45□□□□□ -0.9
UBA4YHR111W RPL20AP0CX23 172 aaKnown RBP9.45□□□□□ -0.9
UBA4YHR111W RPL20BP0CX24 172 aaPredicted RBP9.45□□□□□ -0.9
UBA4YHR111W AAC3P18238 307 aa9.45□□□□□ -0.9
UBA4YHR111W PRP4P20053 465 aaKnown RBP9.45□□□□□ -0.9
UBA4YHR111W YCL049CP25577 312 aa9.45□□□□□ -0.9
UBA4YHR111W DGR2P32330 852 aa9.45□□□□□ -0.9
UBA4YHR111W MOH1P38191 138 aa9.45□□□□□ -0.9
UBA4YHR111W RIC1P40395 1056 aa9.45□□□□□ -0.9
UBA4YHR111W IAH1P41734 238 aa9.45□□□□□ -0.9
UBA4YHR111W MDV1P47025 714 aa9.45□□□□□ -0.9
UBA4YHR111W APS3P47064 194 aa9.45□□□□□ -0.9
UBA4YHR111W RPS12P48589 143 aaKnown RBP9.45□□□□□ -0.9
UBA4YHR111W DIA3P52290 468 aa9.45□□□□□ -0.9
UBA4YHR111W ARI1P53111 347 aaKnown RBP9.45□□□□□ -0.9
UBA4YHR111W TPC1P53257 314 aa9.45□□□□□ -0.9
UBA4YHR111W YPS7Q06325 596 aa9.45□□□□□ -0.9
UBA4YHR111W CYK3Q07533 885 aa9.45□□□□□ -0.9
UBA4YHR111W AI1P03875 834 aa9.44□□□□□ -0.9
UBA4YHR111W TOP3P13099 656 aa9.44□□□□□ -0.9
UBA4YHR111W CSM1P25651 190 aa9.44□□□□□ -0.9
UBA4YHR111W SEA4P38164 1038 aa9.44□□□□□ -0.9
UBA4YHR111W IST2P38250 946 aa9.44□□□□□ -0.9
UBA4YHR111W OM14P38325 134 aa9.44□□□□□ -0.9
UBA4YHR111W YHR177WP38867 453 aa9.44□□□□□ -0.9
UBA4YHR111W PZF1P39933 429 aa9.44□□□□□ -0.9
UBA4YHR111W TPA1P40032 644 aaKnown RBP9.44□□□□□ -0.9
UBA4YHR111W COG2P53271 262 aa9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms