RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C MTR3P48240 250 aaPredicted RBP12.32□□□□□ -0.44
SHU1YHL006C RNR4P49723 345 aaKnown RBP12.32□□□□□ -0.44
SHU1YHL006C HOS2P53096 452 aaPredicted RBP12.32□□□□□ -0.44
SHU1YHL006C SHE9Q04172 456 aa12.32□□□□□ -0.44
SHU1YHL006C YHC1Q05900 231 aaKnown RBP12.32□□□□□ -0.44
SHU1YHL006C GMC2Q06201 188 aa12.32□□□□□ -0.44
SHU1YHL006C PRP46Q12417 451 aaPredicted RBP12.32□□□□□ -0.44
SHU1YHL006C YPT6Q99260 215 aa12.32□□□□□ -0.44
SHU1YHL006C UNG1P12887 359 aa12.31□□□□□ -0.44
SHU1YHL006C FES1P38260 290 aa12.31□□□□□ -0.44
SHU1YHL006C MDV1P47025 714 aa12.31□□□□□ -0.44
SHU1YHL006C EFR3Q03653 782 aaKnown RBP12.31□□□□□ -0.44
SHU1YHL006C MMP1Q12372 583 aa12.31□□□□□ -0.44
SHU1YHL006C SNF8Q12483 233 aa12.31□□□□□ -0.44
SHU1YHL006C YKL033W-AQ86ZR7 236 aa12.31□□□□□ -0.44
SHU1YHL006C ARG81P05085 880 aa12.3□□□□□ -0.44
SHU1YHL006C RPL20AP0CX23 172 aaKnown RBP12.3□□□□□ -0.44
SHU1YHL006C RPL20BP0CX24 172 aaPredicted RBP12.3□□□□□ -0.44
SHU1YHL006C TDA11P38854 504 aa12.3□□□□□ -0.44
SHU1YHL006C PAC1P39946 494 aaKnown RBP12.3□□□□□ -0.44
SHU1YHL006C TPC1P53257 314 aa12.3□□□□□ -0.44
SHU1YHL006C YPR172WQ06608 200 aa12.3□□□□□ -0.44
SHU1YHL006C YPR091CQ06833 770 aa12.3□□□□□ -0.44
SHU1YHL006C FMP45Q07651 309 aa12.3□□□□□ -0.44
SHU1YHL006C YOR365CQ08844 703 aa12.3□□□□□ -0.44
SHU1YHL006C YVC1Q12324 675 aa12.3□□□□□ -0.44
SHU1YHL006C YRM1Q12340 786 aa12.3□□□□□ -0.44
SHU1YHL006C SKS1Q12505 502 aa12.3□□□□□ -0.44
SHU1YHL006C RPP2BP02400 110 aaKnown RBP12.29□□□□□ -0.44
SHU1YHL006C RPB5P20434 215 aa12.29□□□□□ -0.44
SHU1YHL006C LTV1P34078 463 aa12.29□□□□□ -0.44
SHU1YHL006C CHS7P38843 316 aa12.29□□□□□ -0.44
SHU1YHL006C RPS26AP39938 119 aaKnown RBP12.29□□□□□ -0.44
SHU1YHL006C RPS26BP39939 119 aaKnown RBP12.29□□□□□ -0.44
SHU1YHL006C YEL057CP39983 233 aa12.29□□□□□ -0.44
SHU1YHL006C YJL043WP47053 257 aa12.29□□□□□ -0.44
SHU1YHL006C IMA1P53051 589 aa12.29□□□□□ -0.44
SHU1YHL006C ATG4P53867 494 aa12.29□□□□□ -0.44
SHU1YHL006C YNL092WP53934 400 aa12.29□□□□□ -0.44
SHU1YHL006C SKI8Q02793 397 aaPredicted RBP12.29□□□□□ -0.44
SHU1YHL006C YMR010WQ03687 405 aa12.29□□□□□ -0.44
SHU1YHL006C MLH3Q12083 715 aa12.29□□□□□ -0.44
SHU1YHL006C YDL177CQ12257 170 aa12.29□□□□□ -0.44
SHU1YHL006C PHO81P17442 1178 aa12.28□□□□□ -0.44
SHU1YHL006C GRR1P24814 1151 aa12.28□□□□□ -0.44
SHU1YHL006C NUD1P32336 851 aa12.28□□□□□ -0.44
SHU1YHL006C VPS51P36116 164 aa12.28□□□□□ -0.44
SHU1YHL006C SCO2P38072 301 aa12.28□□□□□ -0.44
SHU1YHL006C ROM1P53046 1155 aa12.28□□□□□ -0.44
SHU1YHL006C ARI1P53111 347 aaKnown RBP12.28□□□□□ -0.44
SHU1YHL006C MPA43P53583 542 aaPredicted RBP12.28□□□□□ -0.44
SHU1YHL006C RPM2Q02773 1202 aa12.28□□□□□ -0.44
SHU1YHL006C LGE1Q02796 332 aaKnown RBP12.28□□□□□ -0.44
SHU1YHL006C SMA2Q04658 369 aa12.28□□□□□ -0.44
SHU1YHL006C YMR310CQ04867 317 aaPredicted RBP12.28□□□□□ -0.44
SHU1YHL006C YOL131WQ08270 108 aa12.28□□□□□ -0.44
SHU1YHL006C FDH1Q08911 376 aa12.28□□□□□ -0.44
SHU1YHL006C AAC3P18238 307 aa12.27□□□□□ -0.45
SHU1YHL006C RVS161P25343 265 aaKnown RBP12.27□□□□□ -0.45
SHU1YHL006C GFD2P25370 566 aaKnown RBP12.27□□□□□ -0.45
SHU1YHL006C PHO91P27514 894 aa12.27□□□□□ -0.45
SHU1YHL006C MRE11P32829 692 aa12.27□□□□□ -0.45
SHU1YHL006C SIP2P34164 415 aaKnown RBP12.27□□□□□ -0.45
SHU1YHL006C VPS41P38959 992 aa12.27□□□□□ -0.45
SHU1YHL006C LYS12P40495 371 aaKnown RBP12.27□□□□□ -0.45
SHU1YHL006C GAB1P41733 394 aa12.27□□□□□ -0.45
SHU1YHL006C IRC6P43615 237 aa12.27□□□□□ -0.45
SHU1YHL006C RAP1P11938 827 aa12.26□□□□□ -0.45
SHU1YHL006C MCK1P21965 375 aaKnown RBP12.26□□□□□ -0.45
SHU1YHL006C GPI16P38875 610 aa12.26□□□□□ -0.45
SHU1YHL006C CIN1P40987 1014 aa12.26□□□□□ -0.45
SHU1YHL006C TRS85P46944 698 aa12.26□□□□□ -0.45
SHU1YHL006C APS3P47064 194 aa12.26□□□□□ -0.45
SHU1YHL006C YLL007CQ07799 665 aa12.26□□□□□ -0.45
SHU1YHL006C YLR036CQ07986 203 aa12.26□□□□□ -0.45
SHU1YHL006C PRS5Q12265 496 aaKnown RBP12.26□□□□□ -0.45
SHU1YHL006C NOP58Q12499 511 aaKnown RBP12.26□□□□□ -0.45
SHU1YHL006C YOR032W-AQ8TGS1 66 aa12.26□□□□□ -0.45
SHU1YHL006C EMP70P32802 667 aa12.25□□□□□ -0.45
SHU1YHL006C DHR2P36009 735 aaPredicted RBP12.25□□□□□ -0.45
SHU1YHL006C MRPL17P36528 281 aa12.25□□□□□ -0.45
SHU1YHL006C SEH1P53011 349 aaKnown RBP12.25□□□□□ -0.45
SHU1YHL006C YPL068CQ02749 293 aa12.25□□□□□ -0.45
SHU1YHL006C BSC1Q12140 328 aa12.25□□□□□ -0.45
SHU1YHL006C SAC7P17121 654 aa12.24□□□□□ -0.45
SHU1YHL006C EXO70P19658 623 aa12.24□□□□□ -0.45
SHU1YHL006C OXP1P28273 1286 aa12.24□□□□□ -0.45
SHU1YHL006C UBC9P50623 157 aaPredicted RBP12.24□□□□□ -0.45
SHU1YHL006C ATP25Q03153 612 aa12.24□□□□□ -0.45
SHU1YHL006C CCA1P21269 546 aa12.23□□□□□ -0.45
SHU1YHL006C RAD14P28519 371 aa12.23□□□□□ -0.45
SHU1YHL006C MRPS18P42847 217 aa12.23□□□□□ -0.45
SHU1YHL006C YPL107WQ02873 248 aa12.23□□□□□ -0.45
SHU1YHL006C CGI121Q03705 181 aaKnown RBP12.23□□□□□ -0.45
SHU1YHL006C RPB10P22139 70 aa12.22□□□□□ -0.45
SHU1YHL006C NUP2P32499 720 aa12.22□□□□□ -0.45
SHU1YHL006C TAT2P38967 592 aa12.22□□□□□ -0.45
SHU1YHL006C YEL020CP39994 560 aa12.22□□□□□ -0.45
SHU1YHL006C RGI1P40043 161 aaPredicted RBP12.22□□□□□ -0.45
SHU1YHL006C RIC1P40395 1056 aa12.22□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms