RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS23	YGL056C	BUB3	P26449	341 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	YSC83	P32792	385 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	PPZ2	P33329	710 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	PHD1	P36093	366 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	QDR3	P38227	689 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	YPS6	P40583	537 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
SDS23	YGL056C	YPT11	P48559	417 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	DSL1	P53847	754 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	IDP3	P53982	420 aa	Known RBP	3.56	□□□□□ -1.84
SDS23	YGL056C	SNT309	Q06091	175 aa	Predicted RBP	3.56	□□□□□ -1.84
SDS23	YGL056C	SRN2	Q99176	213 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	AUS1	Q08409	1394 aa		3.56	□□□□□ -1.84
SDS23	YGL056C	SAG1	P20840	650 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	HSP104	P31539	908 aa	Known RBP	3.55	□□□□□ -1.84
SDS23	YGL056C	SMY1	P32364	656 aa	Known RBP	3.55	□□□□□ -1.84
SDS23	YGL056C	APE2	P32454	952 aa	Known RBP	3.55	□□□□□ -1.84
SDS23	YGL056C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
SDS23	YGL056C	SPP381	P38282	291 aa	Predicted RBP	3.55	□□□□□ -1.84
SDS23	YGL056C	PCF11	P39081	626 aa	Predicted RBP	3.55	□□□□□ -1.84
SDS23	YGL056C	RTS2	P40962	232 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	PRM1	P53835	661 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	GIP3	Q03016	1276 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	VPS20	Q04272	221 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	NSE1	Q07913	336 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	BSC1	Q12140	328 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	RUP1	Q12242	671 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	YOR012W	Q12351	137 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	LYS2	P07702	1392 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	CHS1	P08004	1131 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	IMA3	P0CW40	589 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	IMA4	P0CW41	589 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	ERG11	P10614	530 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	ECM25	P32525	599 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	PDR3	P33200	976 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	PTK1	P36002	662 aa	Predicted RBP	3.55	□□□□□ -1.84
SDS23	YGL056C	SPC34	P36131	295 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	MRPL40	P36534	297 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	INM1	P38710	295 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	RTT107	P38850	1070 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	LIN1	P38852	340 aa	Predicted RBP	3.55	□□□□□ -1.84
SDS23	YGL056C	SPC97	P38863	823 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	YNL234W	P53857	426 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	IZH1	Q03419	316 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	TAF12	Q03761	539 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	YMR087W	Q04299	284 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	MRPL1	Q04599	285 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	GLO2	Q05584	274 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	MSC3	Q05812	728 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	GSH2	Q08220	491 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	THI20	Q08224	551 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	IMA2	Q08295	589 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	BUG1	Q12191	341 aa		3.55	□□□□□ -1.84
SDS23	YGL056C	YPT1	P01123	206 aa	Known RBP	3.54	□□□□□ -1.84
SDS23	YGL056C	CTR86	P25355	563 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	PSO2	P30620	661 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	FRE1	P32791	686 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	ERG7	P38604	731 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	OSH3	P38713	996 aa	Known RBP	3.54	□□□□□ -1.84
SDS23	YGL056C	TOM71	P38825	639 aa	Known RBP	3.54	□□□□□ -1.84
SDS23	YGL056C	YHR177W	P38867	453 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	YAL037W	P39728	267 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	SNO3	P43544	222 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	RRP46	P53256	223 aa	Predicted RBP	3.54	□□□□□ -1.84
SDS23	YGL056C	PCP1	P53259	346 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	YNL050C	P53952	270 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
SDS23	YGL056C	RRB1	Q04225	511 aa	Known RBP	3.54	□□□□□ -1.84
SDS23	YGL056C	BNA5	Q05979	453 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	ORM2	Q06144	216 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	RNH203	Q12338	110 aa		3.54	□□□□□ -1.84
SDS23	YGL056C	RIM15	P43565	1770 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	CDC21	P06785	304 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	TUB1	P09733	447 aa	Known RBP	3.53	□□□□□ -1.84
SDS23	YGL056C	OM45	P16547	393 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	YAP1	P19880	650 aa	Known RBP	3.53	□□□□□ -1.84
SDS23	YGL056C	GRR1	P24814	1151 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	RAD57	P25301	460 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	CYS4	P32582	507 aa	Known RBP	3.53	□□□□□ -1.84
SDS23	YGL056C	SSE1	P32589	693 aa	Known RBP	3.53	□□□□□ -1.84
SDS23	YGL056C	YPK3	P38070	525 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	YBR139W	P38109	508 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	KAP104	P38217	918 aa	Known RBP	3.53	□□□□□ -1.84
SDS23	YGL056C	FLO5	P38894	1075 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	YIL024C	P40543	189 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	CFD1	P40558	293 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	YIR014W	P40570	242 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	PAC11	P40960	533 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	IAH1	P41734	238 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	SAM50	P53969	484 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	MSS11	Q03825	758 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	URH1	Q04179	340 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	SMA2	Q04658	369 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	NRT1	Q08485	598 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	PKH2	Q12236	1081 aa	Known RBP	3.53	□□□□□ -1.84
SDS23	YGL056C	CRC1	Q12289	327 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	ARP6	Q12509	438 aa		3.53	□□□□□ -1.84
SDS23	YGL056C	VPS63	O13549	108 aa		3.52	□□□□□ -1.85
SDS23	YGL056C	HIS4	P00815	799 aa	Known RBP	3.52	□□□□□ -1.85
SDS23	YGL056C	CBP2	P03874	630 aa	Predicted RBP	3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms