RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W YAL037WP39728 267 aa4.55□□□□□ -1.68
DEG1YFL001W PCL6P40038 420 aa4.55□□□□□ -1.68
DEG1YFL001W OSW5P40219 148 aa4.55□□□□□ -1.68
DEG1YFL001W ESBP6P53918 673 aa4.55□□□□□ -1.68
DEG1YFL001W RPL15BP54780 204 aaPredicted RBP4.55□□□□□ -1.68
DEG1YFL001W GIP3Q03016 1276 aa4.55□□□□□ -1.68
DEG1YFL001W MLH2Q07980 695 aa4.55□□□□□ -1.68
DEG1YFL001W NDJ1Q12366 352 aa4.55□□□□□ -1.68
DEG1YFL001W SEC7P11075 2009 aaKnown RBP4.55□□□□□ -1.68
DEG1YFL001W YPT1P01123 206 aaKnown RBP4.54□□□□□ -1.68
DEG1YFL001W AMD1P15274 810 aaKnown RBP4.54□□□□□ -1.68
DEG1YFL001W EXO70P19658 623 aa4.54□□□□□ -1.68
DEG1YFL001W AIM17P23180 465 aaKnown RBP4.54□□□□□ -1.68
DEG1YFL001W CTR86P25355 563 aa4.54□□□□□ -1.68
DEG1YFL001W NRP1P32770 719 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
DEG1YFL001W FRE1P32791 686 aa4.54□□□□□ -1.68
DEG1YFL001W MNL1P38888 796 aa4.54□□□□□ -1.68
DEG1YFL001W YDR089WP38966 869 aa4.54□□□□□ -1.68
DEG1YFL001W GUF1P46943 645 aa4.54□□□□□ -1.68
DEG1YFL001W URH1Q04179 340 aa4.54□□□□□ -1.68
DEG1YFL001W RRB1Q04225 511 aaKnown RBP4.54□□□□□ -1.68
DEG1YFL001W YMR087WQ04299 284 aa4.54□□□□□ -1.68
DEG1YFL001W NRT1Q08485 598 aa4.54□□□□□ -1.68
DEG1YFL001W MDY2Q12285 212 aa4.54□□□□□ -1.68
DEG1YFL001W STE3P06783 470 aa4.53□□□□□ -1.68
DEG1YFL001W NFT1P0CE68 1218 aa4.53□□□□□ -1.68
DEG1YFL001W MGR1P25573 417 aa4.53□□□□□ -1.68
DEG1YFL001W QDR3P38227 689 aa4.53□□□□□ -1.68
DEG1YFL001W MSG5P38590 489 aa4.53□□□□□ -1.68
DEG1YFL001W INM1P38710 295 aa4.53□□□□□ -1.68
DEG1YFL001W YAP3P38749 330 aa4.53□□□□□ -1.68
DEG1YFL001W PAC11P40960 533 aa4.53□□□□□ -1.68
DEG1YFL001W BRO1P48582 844 aa4.53□□□□□ -1.68
DEG1YFL001W PCP1P53259 346 aa4.53□□□□□ -1.68
DEG1YFL001W SEG1Q04279 960 aa4.53□□□□□ -1.68
DEG1YFL001W SNT309Q06091 175 aaPredicted RBP4.53□□□□□ -1.68
DEG1YFL001W SYO1Q07395 620 aa4.53□□□□□ -1.68
DEG1YFL001W RPL42AP0CX27 106 aaKnown RBP4.52□□□□□ -1.69
DEG1YFL001W RPL42BP0CX28 106 aaKnown RBP4.52□□□□□ -1.69
DEG1YFL001W MDM10P18409 493 aa4.52□□□□□ -1.69
DEG1YFL001W SEC62P21825 274 aa4.52□□□□□ -1.69
DEG1YFL001W RAD57P25301 460 aa4.52□□□□□ -1.69
DEG1YFL001W CYS4P32582 507 aaKnown RBP4.52□□□□□ -1.69
DEG1YFL001W YSC83P32792 385 aa4.52□□□□□ -1.69
DEG1YFL001W MIC60P36112 540 aa4.52□□□□□ -1.69
DEG1YFL001W KAP104P38217 918 aaKnown RBP4.52□□□□□ -1.69
DEG1YFL001W YFR016CP43597 1233 aaKnown RBP4.52□□□□□ -1.69
DEG1YFL001W YGL082WP53155 381 aa4.52□□□□□ -1.69
DEG1YFL001W HST1P53685 503 aa4.52□□□□□ -1.69
DEG1YFL001W PRM1P53835 661 aa4.52□□□□□ -1.69
DEG1YFL001W TDA7P53882 636 aaPredicted RBP4.52□□□□□ -1.69
DEG1YFL001W GPI15P53961 229 aa4.52□□□□□ -1.69
DEG1YFL001W ERV25P54837 211 aaKnown RBP4.52□□□□□ -1.69
DEG1YFL001W BET4Q00618 327 aa4.52□□□□□ -1.69
DEG1YFL001W MRPL51Q06090 140 aaPredicted RBP4.52□□□□□ -1.69
DEG1YFL001W YLL056CQ12177 298 aa4.52□□□□□ -1.69
DEG1YFL001W YDL009CQ12210 107 aa4.52□□□□□ -1.69
DEG1YFL001W DNF2Q12675 1612 aa4.52□□□□□ -1.69
DEG1YFL001W CDC21P06785 304 aa4.51□□□□□ -1.69
DEG1YFL001W CHS1P08004 1131 aa4.51□□□□□ -1.69
DEG1YFL001W HNM1P19807 563 aa4.51□□□□□ -1.69
DEG1YFL001W STP2P38704 541 aa4.51□□□□□ -1.69
DEG1YFL001W RTT107P38850 1070 aa4.51□□□□□ -1.69
DEG1YFL001W VPS52P39904 641 aa4.51□□□□□ -1.69
DEG1YFL001W ISC1P40015 477 aaKnown RBP4.51□□□□□ -1.69
DEG1YFL001W PSA1P41940 361 aaKnown RBP4.51□□□□□ -1.69
DEG1YFL001W YIP1P53039 248 aa4.51□□□□□ -1.69
DEG1YFL001W MPS2P53159 387 aa4.51□□□□□ -1.69
DEG1YFL001W PNG1Q02890 363 aa4.51□□□□□ -1.69
DEG1YFL001W REX4Q08237 289 aa4.51□□□□□ -1.69
DEG1YFL001W ATG34Q12292 412 aa4.51□□□□□ -1.69
DEG1YFL001W CHC1P22137 1653 aaKnown RBP4.5□□□□□ -1.69
DEG1YFL001W RPC40P07703 335 aaKnown RBP4.5□□□□□ -1.69
DEG1YFL001W IMA3P0CW40 589 aa4.5□□□□□ -1.69
DEG1YFL001W IMA4P0CW41 589 aa4.5□□□□□ -1.69
DEG1YFL001W YCP4P25349 247 aaKnown RBP4.5□□□□□ -1.69
DEG1YFL001W DAL80P26343 269 aa4.5□□□□□ -1.69
DEG1YFL001W ERG1P32476 496 aaKnown RBP4.5□□□□□ -1.69
DEG1YFL001W YCR041WP37265 110 aa4.5□□□□□ -1.69
DEG1YFL001W HMS2P47175 358 aa4.5□□□□□ -1.69
DEG1YFL001W RTT102P53330 157 aa4.5□□□□□ -1.69
DEG1YFL001W IRC15Q02733 499 aa4.5□□□□□ -1.69
DEG1YFL001W RIM13Q03792 727 aa4.5□□□□□ -1.69
DEG1YFL001W YMR254CQ04838 102 aa4.5□□□□□ -1.69
DEG1YFL001W COQ11Q05892 277 aa4.5□□□□□ -1.69
DEG1YFL001W VPS74Q06385 345 aa4.5□□□□□ -1.69
DEG1YFL001W IMA2Q08295 589 aa4.5□□□□□ -1.69
DEG1YFL001W SKI7Q08491 747 aaPredicted RBP4.5□□□□□ -1.69
DEG1YFL001W SAG1P20840 650 aa4.49□□□□□ -1.69
DEG1YFL001W PSO2P30620 661 aa4.49□□□□□ -1.69
DEG1YFL001W YNK1P36010 153 aaKnown RBP4.49□□□□□ -1.69
DEG1YFL001W RIM2P38127 377 aa4.49□□□□□ -1.69
DEG1YFL001W YBL028CP38202 106 aa4.49□□□□□ -1.69
DEG1YFL001W SPP381P38282 291 aaPredicted RBP4.49□□□□□ -1.69
DEG1YFL001W LYS1P38998 373 aaRIP-Chip data4.49□□□□□ -1.69not detected
DEG1YFL001W SNM1P40993 198 aa4.49□□□□□ -1.69
DEG1YFL001W NUP53Q03790 475 aa4.49□□□□□ -1.69
DEG1YFL001W VPS20Q04272 221 aa4.49□□□□□ -1.69
DEG1YFL001W YEH2Q07950 538 aa4.49□□□□□ -1.69
DEG1YFL001W SGT1Q08446 395 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms