RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W NBP1P52919 319 aaPredicted RBP5.03□□□□□ -1.6
UBP9YER098W NOP19P53317 196 aaPredicted RBP5.03□□□□□ -1.6
UBP9YER098W SPC98P53540 846 aa5.03□□□□□ -1.6
UBP9YER098W YAT1P80235 687 aa5.03□□□□□ -1.6
UBP9YER098W SLT2Q00772 484 aa5.03□□□□□ -1.6
UBP9YER098W YPL107WQ02873 248 aa5.03□□□□□ -1.6
UBP9YER098W RSF1Q05043 376 aa5.03□□□□□ -1.6
UBP9YER098W INM2Q05533 292 aa5.03□□□□□ -1.6
UBP9YER098W DBP9Q06218 594 aaKnown RBP5.03□□□□□ -1.6
UBP9YER098W YDL057WQ07379 328 aa5.03□□□□□ -1.6
UBP9YER098W YDL086WQ07505 273 aa5.03□□□□□ -1.6
UBP9YER098W GPM3Q12326 303 aa5.03□□□□□ -1.6
UBP9YER098W ATG31Q12421 196 aa5.03□□□□□ -1.6
UBP9YER098W NFT1P0CE68 1218 aa5.02□□□□□ -1.61
UBP9YER098W KIN3P22209 435 aa5.02□□□□□ -1.61
UBP9YER098W ERV1P27882 189 aa5.02□□□□□ -1.61
UBP9YER098W LST4P34239 828 aa5.02□□□□□ -1.61
UBP9YER098W VPS51P36116 164 aa5.02□□□□□ -1.61
UBP9YER098W ECM31P38122 312 aa5.02□□□□□ -1.61
UBP9YER098W SLX1P38324 304 aa5.02□□□□□ -1.61
UBP9YER098W UTP18P40362 594 aaPredicted RBP5.02□□□□□ -1.61
UBP9YER098W YFL040WP43562 540 aa5.02□□□□□ -1.61
UBP9YER098W SAD1P43589 448 aa5.02□□□□□ -1.61
UBP9YER098W RPS7BP48164 190 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W STR3P53101 465 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W SNF12P53628 566 aa5.02□□□□□ -1.61
UBP9YER098W VAC7P53950 1165 aa5.02□□□□□ -1.61
UBP9YER098W RPA49Q01080 415 aaPredicted RBP5.02□□□□□ -1.61
UBP9YER098W RPN9Q04062 393 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W MYO5Q04439 1219 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W ADE13Q05911 482 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W KEL3Q08979 651 aaPredicted RBP5.02□□□□□ -1.61
UBP9YER098W MED4Q12343 284 aa5.02□□□□□ -1.61
UBP9YER098W HRT3Q12347 344 aa5.02□□□□□ -1.61
UBP9YER098W RRP36Q12481 300 aaPredicted RBP5.02□□□□□ -1.61
UBP9YER098W STF1P01098 86 aa5.02□□□□□ -1.61
UBP9YER098W RPS13P05756 151 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W SIR3P06701 978 aa5.02□□□□□ -1.61
UBP9YER098W OTU2P38747 307 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W PET130P47065 347 aa5.02□□□□□ -1.61
UBP9YER098W BUD17P53727 317 aa5.02□□□□□ -1.61
UBP9YER098W FYV6P53913 173 aa5.02□□□□□ -1.61
UBP9YER098W MUK1Q02866 612 aa5.02□□□□□ -1.61
UBP9YER098W TMA10Q06177 86 aa5.02□□□□□ -1.61
UBP9YER098W MRI1Q06489 411 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W DTD1Q07648 150 aaKnown RBP5.02□□□□□ -1.61
UBP9YER098W YIL002W-AQ3E7Z5 69 aa5.02□□□□□ -1.61
UBP9YER098W COX1P00401 534 aa5.01□□□□□ -1.61
UBP9YER098W RAD10P06838 210 aa5.01□□□□□ -1.61
UBP9YER098W YPK1P12688 680 aaKnown RBP5.01□□□□□ -1.61
UBP9YER098W CMK2P22517 447 aa5.01□□□□□ -1.61
UBP9YER098W VMA16P23968 213 aa5.01□□□□□ -1.61
UBP9YER098W YSP3P25036 478 aa5.01□□□□□ -1.61
UBP9YER098W SPB1P25582 841 aaPredicted RBP5.01□□□□□ -1.61
UBP9YER098W VMA6P32366 345 aaKnown RBP5.01□□□□□ -1.61
UBP9YER098W SSO1P32867 290 aa5.01□□□□□ -1.61
UBP9YER098W PMT1P33775 817 aa5.01□□□□□ -1.61
UBP9YER098W MRPL17P36528 281 aa5.01□□□□□ -1.61
UBP9YER098W ASG1P40467 964 aa5.01□□□□□ -1.61
UBP9YER098W BIR1P47134 954 aa5.01□□□□□ -1.61
UBP9YER098W BUL1P48524 976 aa5.01□□□□□ -1.61
UBP9YER098W KEL2P50090 882 aa5.01□□□□□ -1.61
UBP9YER098W STB4P50104 949 aa5.01□□□□□ -1.61
UBP9YER098W ORC5P50874 479 aa5.01□□□□□ -1.61
UBP9YER098W YIP4P53093 235 aa5.01□□□□□ -1.61
UBP9YER098W CUL3P53202 744 aa5.01□□□□□ -1.61
UBP9YER098W RET3P53600 189 aa5.01□□□□□ -1.61
UBP9YER098W IMP4P53941 290 aaKnown RBP5.01□□□□□ -1.61
UBP9YER098W RSN1Q03516 953 aa5.01□□□□□ -1.61
UBP9YER098W ECM11Q04110 302 aa5.01□□□□□ -1.61
UBP9YER098W UFO1Q04511 668 aa5.01□□□□□ -1.61
UBP9YER098W RQC1Q05468 723 aaKnown RBP5.01□□□□□ -1.61
UBP9YER098W SWA2Q06677 668 aa5.01□□□□□ -1.61
UBP9YER098W YLL007CQ07799 665 aa5.01□□□□□ -1.61
UBP9YER098W SNU23Q12368 194 aaPredicted RBP5.01□□□□□ -1.61
UBP9YER098W RTR2Q12378 196 aa5.01□□□□□ -1.61
UBP9YER098W DFG16Q99234 619 aa5.01□□□□□ -1.61
UBP9YER098W RIM15P43565 1770 aa5.01□□□□□ -1.61
UBP9YER098W BI2P03873 423 aa5□□□□□ -1.61
UBP9YER098W GAL3P13045 520 aa5□□□□□ -1.61
UBP9YER098W AMD2P22580 549 aa5□□□□□ -1.61
UBP9YER098W SYN8P31377 255 aa5□□□□□ -1.61
UBP9YER098W ASF2P32448 525 aaPredicted RBP5□□□□□ -1.61
UBP9YER098W SIP1P32578 815 aa5□□□□□ -1.61
UBP9YER098W TAF14P35189 244 aa5□□□□□ -1.61
UBP9YER098W MNN9P39107 395 aaKnown RBP5□□□□□ -1.61
UBP9YER098W ECM10P39987 644 aa5□□□□□ -1.61
UBP9YER098W FMP52P40008 231 aa5□□□□□ -1.61
UBP9YER098W KRE29P40026 464 aa5□□□□□ -1.61
UBP9YER098W ELP2P42935 788 aa5□□□□□ -1.61
UBP9YER098W YGR151CP53287 111 aa5□□□□□ -1.61
UBP9YER098W YMR010WQ03687 405 aa5□□□□□ -1.61
UBP9YER098W APC9Q12107 265 aa5□□□□□ -1.61
UBP9YER098W AVL9Q12500 764 aa5□□□□□ -1.61
UBP9YER098W RIF1P29539 1916 aa5□□□□□ -1.61
UBP9YER098W TEF1P02994 458 aaKnown RBP5□□□□□ -1.61
UBP9YER098W CMC1P36064 111 aa5□□□□□ -1.61
UBP9YER098W NAT2P37293 288 aa5□□□□□ -1.61
UBP9YER098W ARA1P38115 344 aa5□□□□□ -1.61
UBP9YER098W MIT1P40002 666 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms