RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	YHR182W	P38870	785 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	SUR2	P38992	349 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	DHH1	P39517	506 aa	Known RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	JLP2	P40206	208 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YIL089W	P40500	205 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	CIN5	P40917	295 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	LOC1	P43586	204 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	ALB1	P47019	175 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	VMA10	P48836	114 aa	Known RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	RMR1	P53060	241 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YGL242C	P53066	181 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	PKP2	P53170	491 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	DUG3	P53871	357 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	KAP120	Q02932	1032 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	MRPS17	Q03246	237 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	ABZ2	Q03266	374 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	VPS60	Q03390	229 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	DML1	Q03652	475 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YDL057W	Q07379	328 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	RTT109	Q07794	436 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YEH2	Q07950	538 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	RIM20	Q12033	661 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	RLM1	Q12224	676 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	SET6	Q12529	373 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	SRN2	Q99176	213 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	ARG80	P07249	177 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	UNG1	P12887	359 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	DBP3	P20447	523 aa	Known RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	SEC14	P24280	304 aa	Known RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	ROX1	P25042	368 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	RRP7	P25368	297 aa	Predicted RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	PHO91	P27514	894 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	PRO3	P32263	286 aa	Known RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	HXT1	P32465	570 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	YME1	P32795	747 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	MTR2	P34232	184 aa	Known RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	SIF2	P38262	535 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	BMT2	P38278	337 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	STP2	P38704	541 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	SHQ1	P40486	507 aa	Predicted RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	UTP25	P40498	721 aa	Known RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	MET28	P40573	187 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	GUF1	P46943	645 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	PET130	P47065	347 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	COX16	P47081	118 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	YGR117C	P53270	476 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	SMM1	P53720	384 aa	Known RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	MPP6	P53725	186 aa	Predicted RBP	2.97	□□□□□ -1.93
VMA8	YEL051W	GOR1	P53839	350 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	PGA2	P53903	129 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	SAM50	P53969	484 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	OAZ1	Q02803	292 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	URC2	Q04411	772 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	AIM32	Q04689	311 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	DCS1	Q06151	350 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	YBR298C-A	Q8TGK4	73 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	RAD61	Q99359	647 aa		2.97	□□□□□ -1.93
VMA8	YEL051W	PUT2	P07275	575 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	MATALPHA2	P0CY08	210 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	HMLALPHA2	P0CY09	210 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	ALG1	P16661	449 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	BUD5	P25300	642 aa	Predicted RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	GEX1	P25596	615 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	YCR016W	P25617	290 aa	Known RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	ICL1	P28240	557 aa	Predicted RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	ERG1	P32476	496 aa	Known RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	NPL6	P32832	435 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	PRS1	P32895	427 aa	Known RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	WBP1	P33767	430 aa	Known RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	KKQ8	P36004	724 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	SPC34	P36131	295 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	VID24	P38263	362 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	UBA4	P38820	440 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	YER130C	P39959	443 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	RTR1	P40084	226 aa	Predicted RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	SYG1	P40528	902 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	DIM1	P41819	318 aa	Known RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	SLX9	P53251	210 aa	Predicted RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	YGR126W	P53274	230 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	SOL4	P53315	255 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	MRPL50	P53724	139 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	IMP4	P53941	290 aa	Known RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	GIM5	Q04493	163 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	ECM18	Q04623	453 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	GTO3	Q04806	366 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	YPD1	Q07688	167 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	DAS2	Q12084	232 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	LDB17	Q12342	491 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	RTN2	Q12443	393 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	NUP157	P40064	1391 aa	Known RBP	2.96	□□□□□ -1.94
VMA8	YEL051W	MDS3	P53094	1487 aa		2.96	□□□□□ -1.94
VMA8	YEL051W	RAD9	P14737	1309 aa		2.95	□□□□□ -1.94
VMA8	YEL051W	STE2	D6VTK4	431 aa		2.95	□□□□□ -1.94
VMA8	YEL051W	CHS1	P08004	1131 aa		2.95	□□□□□ -1.94
VMA8	YEL051W	PRP2	P20095	876 aa	Predicted RBP	2.95	□□□□□ -1.94
VMA8	YEL051W	MRPS28	P21771	286 aa		2.95	□□□□□ -1.94
VMA8	YEL051W	DBF2	P22204	572 aa		2.95	□□□□□ -1.94
VMA8	YEL051W	MSP1	P28737	362 aa		2.95	□□□□□ -1.94
VMA8	YEL051W	SIN4	P32259	974 aa		2.95	□□□□□ -1.94
VMA8	YEL051W	KAR9	P32526	644 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms