RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	RCK1	P38622	512 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	FAA2	P39518	744 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	MTW1	P39731	289 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	YJL043W	P47053	257 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	DSL1	P53847	754 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	SUR7	P54003	302 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	PEX25	Q02969	394 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	MSC1	Q03104	513 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	APC4	Q04601	652 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	GIC2	Q06648	383 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	GLO4	Q12320	285 aa		6.11	□□□□□ -1.43
VMA3	YEL027W	HTA1	P04911	132 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	RPL17A	P05740	184 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	URA4	P20051	364 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	NPR1	P22211	790 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	CMK2	P22517	447 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	YCL049C	P25577	312 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	SPB1	P25582	841 aa	Predicted RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	CDC12	P32468	407 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	DOA1	P36037	715 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	SKG1	P36169	355 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	YBR241C	P38142	488 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	YHR210C	P38893	341 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	PTI1	P39927	425 aa	Predicted RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	RSP5	P39940	809 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	RPL10	P41805	221 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	PMT4	P46971	762 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	RPL17B	P46990	184 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	HOC1	P47124	396 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	YGR016W	P53209	190 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	YNR068C	P53754	272 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	ELP4	Q02884	456 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	ATG38	Q05789	226 aa	Known RBP	6.1	□□□□□ -1.43
VMA3	YEL027W	TEN1	Q07921	160 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	YOL024W	Q08172	172 aa		6.1	□□□□□ -1.43
VMA3	YEL027W	PRP8	P33334	2413 aa	Known RBP	6.09	□□□□□ -1.43
VMA3	YEL027W	GAL3	P13045	520 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	VPS33	P20795	691 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	CHA1	P25379	360 aa	Known RBP	6.09	□□□□□ -1.43
VMA3	YEL027W	TAH1	P25638	111 aa	Predicted RBP	6.09	□□□□□ -1.43
VMA3	YEL027W	YMC1	P32331	307 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	STP2	P38704	541 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	RBG1	P39729	369 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	FMP33	P46998	180 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	PAC10	P48363	199 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	TOM22	P49334	152 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	YNL095C	P53932	642 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	OAZ1	Q02803	292 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	PEX12	Q04370	399 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	RQC1	Q05468	723 aa	Known RBP	6.09	□□□□□ -1.43
VMA3	YEL027W	ISR1	Q06098	443 aa	Known RBP	6.09	□□□□□ -1.43
VMA3	YEL027W	YLR036C	Q07986	203 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	THP1	Q08231	455 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	MCA1	Q08601	432 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	YPL066W	Q12194	479 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	HSP42	Q12329	375 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	MDM12	Q92328	271 aa		6.09	□□□□□ -1.43
VMA3	YEL027W	YBR056W-A	I2HB52	66 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	HOM3	P10869	527 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	YAK1	P14680	807 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	SLY41	P22215	453 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	CLB3	P24870	427 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	MRPL32	P25348	183 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	PEX3	P28795	441 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	UGP1	P32861	499 aa	Known RBP	6.08	□□□□□ -1.44
VMA3	YEL027W	AST1	P35183	429 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	ATG14	P38270	344 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	YHL012W	P38709	493 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	PRP39	P39682	629 aa	Known RBP	6.08	□□□□□ -1.44
VMA3	YEL027W	AIM2	P39721	246 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	RIC1	P40395	1056 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	ARF3	P40994	183 aa	RIP-Chip data	6.08	□□□□□ -1.44	not detected
VMA3	YEL027W	ATP22	P50273	684 aa	Predicted RBP	6.08	□□□□□ -1.44
VMA3	YEL027W	YGR012W	P53206	393 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	TPP1	Q03796	238 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	GPI11	Q06636	219 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	YEH1	Q07804	573 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	PFK27	Q12471	397 aa	Predicted RBP	6.08	□□□□□ -1.44
VMA3	YEL027W	MHF2	Q3E829	80 aa		6.08	□□□□□ -1.44
VMA3	YEL027W	RAD7	P06779	565 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	STE6	P12866	1290 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	CMK1	P27466	446 aa	Known RBP	6.07	□□□□□ -1.44
VMA3	YEL027W	YJU2	P28320	278 aa	Predicted RBP	6.07	□□□□□ -1.44
VMA3	YEL027W	ARP2	P32381	391 aa	Known RBP	6.07	□□□□□ -1.44
VMA3	YEL027W	LYP1	P32487	611 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	KAP122	P32767	1081 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	YHR177W	P38867	453 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	LYS12	P40495	371 aa	Known RBP	6.07	□□□□□ -1.44
VMA3	YEL027W	MRPS18	P42847	217 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	IKS1	P47042	667 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	ATF2	P53296	535 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	RHO4	Q00246	291 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	REC102	Q02721	264 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	ENT2	Q05785	613 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	RRP15	Q06511	250 aa	Predicted RBP	6.07	□□□□□ -1.44
VMA3	YEL027W	NDL1	Q06568	189 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	ARR1	Q06596	294 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	RRT8	Q08219	342 aa		6.07	□□□□□ -1.44
VMA3	YEL027W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
VMA3	YEL027W	PSY3	Q12318	242 aa		6.07	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms