RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C MAE1P36013 669 aaKnown RBP5.45□□□□□ -1.54
SEC20YDR498C YBR138CP38277 524 aa5.45□□□□□ -1.54
SEC20YDR498C PFS1P38872 237 aa5.45□□□□□ -1.54
SEC20YDR498C RIX1P38883 763 aaPredicted RBP5.45□□□□□ -1.54
SEC20YDR498C COG3P40094 801 aa5.45□□□□□ -1.54
SEC20YDR498C APQ12P40532 138 aa5.45□□□□□ -1.54
SEC20YDR498C SSU1P41930 458 aa5.45□□□□□ -1.54
SEC20YDR498C YFR018CP43599 363 aa5.45□□□□□ -1.54
SEC20YDR498C CWC24P53769 259 aa5.45□□□□□ -1.54
SEC20YDR498C YPL113CQ02961 396 aa5.45□□□□□ -1.54
SEC20YDR498C RSN1Q03516 953 aa5.45□□□□□ -1.54
SEC20YDR498C MUS81Q04149 632 aaPredicted RBP5.45□□□□□ -1.54
SEC20YDR498C YMR226CQ05016 267 aaKnown RBP5.45□□□□□ -1.54
SEC20YDR498C EMG1Q06287 252 aaKnown RBP5.45□□□□□ -1.54
SEC20YDR498C PUN1Q06991 263 aa5.45□□□□□ -1.54
SEC20YDR498C MDM12Q92328 271 aa5.45□□□□□ -1.54
SEC20YDR498C RPC40P07703 335 aaKnown RBP5.44□□□□□ -1.54
SEC20YDR498C MCM1P11746 286 aa5.44□□□□□ -1.54
SEC20YDR498C SCL1P21243 252 aaKnown RBP5.44□□□□□ -1.54
SEC20YDR498C YCL049CP25577 312 aa5.44□□□□□ -1.54
SEC20YDR498C YKL151CP36059 337 aa5.44□□□□□ -1.54
SEC20YDR498C YKR015CP36111 568 aa5.44□□□□□ -1.54
SEC20YDR498C MNN2P38069 597 aa5.44□□□□□ -1.54
SEC20YDR498C RRN10P38204 145 aa5.44□□□□□ -1.54
SEC20YDR498C EGD2P38879 174 aaKnown RBP5.44□□□□□ -1.54
SEC20YDR498C SOP4P39543 234 aaPredicted RBP5.44□□□□□ -1.54
SEC20YDR498C TGL2P54857 326 aa5.44□□□□□ -1.54
SEC20YDR498C TMA20P89886 181 aaPredicted RBP5.44□□□□□ -1.54
SEC20YDR498C ROY1Q04847 553 aa5.44□□□□□ -1.54
SEC20YDR498C SSQ1Q05931 657 aaPredicted RBP5.44□□□□□ -1.54
SEC20YDR498C ATG17Q06410 417 aa5.44□□□□□ -1.54
SEC20YDR498C OPI10Q08202 246 aa5.44□□□□□ -1.54
SEC20YDR498C RSA1Q08932 381 aa5.44□□□□□ -1.54
SEC20YDR498C SRO7Q12038 1033 aa5.44□□□□□ -1.54
SEC20YDR498C YPR064WQ12492 139 aa5.44□□□□□ -1.54
SEC20YDR498C GLT1Q12680 2145 aaKnown RBP5.44□□□□□ -1.54
SEC20YDR498C CSF1Q12150 2958 aa5.43□□□□□ -1.54
SEC20YDR498C ACC1Q00955 2233 aaKnown RBP5.43□□□□□ -1.54
SEC20YDR498C LAT1P12695 482 aaKnown RBP5.43□□□□□ -1.54
SEC20YDR498C MER1P16523 270 aa5.43□□□□□ -1.54
SEC20YDR498C FAR1P21268 830 aa5.43□□□□□ -1.54
SEC20YDR498C RNQ1P25367 405 aa5.43□□□□□ -1.54
SEC20YDR498C AGP1P25376 633 aa5.43□□□□□ -1.54
SEC20YDR498C MKK1P32490 508 aa5.43□□□□□ -1.54
SEC20YDR498C HCS1P34243 683 aa5.43□□□□□ -1.54
SEC20YDR498C TUL1P36096 758 aa5.43□□□□□ -1.54
SEC20YDR498C BNA4P38169 460 aa5.43□□□□□ -1.54
SEC20YDR498C MTG2P38860 518 aa5.43□□□□□ -1.54
SEC20YDR498C YHR177WP38867 453 aa5.43□□□□□ -1.54
SEC20YDR498C YAR028WP39548 234 aa5.43□□□□□ -1.54
SEC20YDR498C AIM2P39721 246 aa5.43□□□□□ -1.54
SEC20YDR498C THO1P40040 218 aaKnown RBP5.43□□□□□ -1.54
SEC20YDR498C FAU1P40099 211 aa5.43□□□□□ -1.54
SEC20YDR498C TED1P40533 473 aa5.43□□□□□ -1.54
SEC20YDR498C COQ5P49017 307 aa5.43□□□□□ -1.54
SEC20YDR498C CDH1P53197 566 aa5.43□□□□□ -1.54
SEC20YDR498C YGR079WP53249 370 aa5.43□□□□□ -1.54
SEC20YDR498C BIO5P53744 561 aaKnown RBP5.43□□□□□ -1.54
SEC20YDR498C YNL165WP53891 406 aa5.43□□□□□ -1.54
SEC20YDR498C TLG1Q03322 224 aa5.43□□□□□ -1.54
SEC20YDR498C FMP42Q04991 504 aa5.43□□□□□ -1.54
SEC20YDR498C HPF1Q05164 967 aa5.43□□□□□ -1.54
SEC20YDR498C TEN1Q07921 160 aa5.43□□□□□ -1.54
SEC20YDR498C REX4Q08237 289 aa5.43□□□□□ -1.54
SEC20YDR498C RRP40Q08285 240 aaKnown RBP5.43□□□□□ -1.54
SEC20YDR498C VIK1Q12045 647 aa5.43□□□□□ -1.54
SEC20YDR498C BSC1Q12140 328 aa5.43□□□□□ -1.54
SEC20YDR498C RIB3Q99258 208 aa5.43□□□□□ -1.54
SEC20YDR498C CET1O13297 549 aaPredicted RBP5.42□□□□□ -1.54
SEC20YDR498C FUS1P11710 512 aa5.42□□□□□ -1.54
SEC20YDR498C IDH1P28834 360 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SEC20YDR498C CTS1P29029 562 aa5.42□□□□□ -1.54
SEC20YDR498C NUP2P32499 720 aa5.42□□□□□ -1.54
SEC20YDR498C PET127P32606 800 aa5.42□□□□□ -1.54
SEC20YDR498C SSO1P32867 290 aa5.42□□□□□ -1.54
SEC20YDR498C LHS1P36016 881 aa5.42□□□□□ -1.54
SEC20YDR498C GIC1P38785 314 aa5.42□□□□□ -1.54
SEC20YDR498C PCF11P39081 626 aaPredicted RBP5.42□□□□□ -1.54
SEC20YDR498C KRE29P40026 464 aa5.42□□□□□ -1.54
SEC20YDR498C SPO73P40031 143 aa5.42□□□□□ -1.54
SEC20YDR498C YTA6P40328 754 aa5.42□□□□□ -1.54
SEC20YDR498C YIL108WP40483 696 aaKnown RBP5.42□□□□□ -1.54
SEC20YDR498C MSS2P40990 351 aa5.42□□□□□ -1.54
SEC20YDR498C QRI7P43122 407 aa5.42□□□□□ -1.54
SEC20YDR498C STE24P47154 453 aa5.42□□□□□ -1.54
SEC20YDR498C HMS2P47175 358 aa5.42□□□□□ -1.54
SEC20YDR498C HXT16P47185 567 aa5.42□□□□□ -1.54
SEC20YDR498C RAD17P48581 401 aa5.42□□□□□ -1.54
SEC20YDR498C PRM8P53174 237 aa5.42□□□□□ -1.54
SEC20YDR498C SYF2P53277 215 aaPredicted RBP5.42□□□□□ -1.54
SEC20YDR498C YNL181WP53878 407 aa5.42□□□□□ -1.54
SEC20YDR498C CUZ1P53899 274 aa5.42□□□□□ -1.54
SEC20YDR498C SWP1Q02795 286 aa5.42□□□□□ -1.54
SEC20YDR498C RRN5Q02983 363 aa5.42□□□□□ -1.54
SEC20YDR498C APC4Q04601 652 aa5.42□□□□□ -1.54
SEC20YDR498C RSA3Q05942 220 aaKnown RBP5.42□□□□□ -1.54
SEC20YDR498C YLR345WQ06137 509 aa5.42□□□□□ -1.54
SEC20YDR498C PDR8Q06149 701 aa5.42□□□□□ -1.54
SEC20YDR498C DBP9Q06218 594 aaKnown RBP5.42□□□□□ -1.54
SEC20YDR498C YLR036CQ07986 203 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms