RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	PRP42	Q03776	544 aa	Known RBP	4.16	□□□□□ -1.74
NSE3	YDR288W	PBA1	Q05778	276 aa		4.16	□□□□□ -1.74
NSE3	YDR288W	RPN5	Q12250	445 aa	Known RBP	4.16	□□□□□ -1.74
NSE3	YDR288W	ATG34	Q12292	412 aa		4.16	□□□□□ -1.74
NSE3	YDR288W	YER078W-A	Q3E7A2	54 aa		4.16	□□□□□ -1.74
NSE3	YDR288W	CDC21	P06785	304 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	SPO12	P17123	173 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	HSP104	P31539	908 aa	Known RBP	4.15	□□□□□ -1.75
NSE3	YDR288W	ATP3	P38077	311 aa	Known RBP	4.15	□□□□□ -1.75
NSE3	YDR288W	GAT2	P40209	560 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	EFM4	P40516	257 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	BRO1	P48582	844 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	BOR1	P53838	576 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	TOF1	P53840	1238 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	HXT11	P54862	567 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	MMT1	Q03218	510 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	RCF1	Q03713	159 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	RPN9	Q04062	393 aa	Known RBP	4.15	□□□□□ -1.75
NSE3	YDR288W	TSR1	Q07381	788 aa	Known RBP	4.15	□□□□□ -1.75
NSE3	YDR288W	RUP1	Q12242	671 aa		4.15	□□□□□ -1.75
NSE3	YDR288W	COX3	P00420	269 aa		4.14	□□□□□ -1.75
NSE3	YDR288W	DST1	P07273	309 aa		4.14	□□□□□ -1.75
NSE3	YDR288W	SPT15	P13393	240 aa	Known RBP	4.14	□□□□□ -1.75
NSE3	YDR288W	PTH1	P38876	190 aa	Known RBP	4.14	□□□□□ -1.75
NSE3	YDR288W	URH1	Q04179	340 aa		4.14	□□□□□ -1.75
NSE3	YDR288W	SCW10	Q04951	389 aa		4.14	□□□□□ -1.75
NSE3	YDR288W	YOR387C	Q08910	206 aa		4.14	□□□□□ -1.75
NSE3	YDR288W	IMA3	P0CW40	589 aa		4.13	□□□□□ -1.75
NSE3	YDR288W	IMA4	P0CW41	589 aa		4.13	□□□□□ -1.75
NSE3	YDR288W	PRM5	P40476	318 aa		4.13	□□□□□ -1.75
NSE3	YDR288W	STD1	Q02794	444 aa		4.13	□□□□□ -1.75
NSE3	YDR288W	RRP9	Q06506	573 aa	Known RBP	4.13	□□□□□ -1.75
NSE3	YDR288W	IMA2	Q08295	589 aa		4.13	□□□□□ -1.75
NSE3	YDR288W	SRL2	Q12020	392 aa		4.13	□□□□□ -1.75
NSE3	YDR288W	ALG1	P16661	449 aa		4.12	□□□□□ -1.75
NSE3	YDR288W	NIP1	P32497	812 aa	Known RBP	4.12	□□□□□ -1.75
NSE3	YDR288W	SEC28	P40509	296 aa	Known RBP	4.12	□□□□□ -1.75
NSE3	YDR288W	YPS6	P40583	537 aa		4.12	□□□□□ -1.75
NSE3	YDR288W	SFH5	P47008	294 aa		4.12	□□□□□ -1.75
NSE3	YDR288W	RHO5	P53879	331 aa	Known RBP	4.12	□□□□□ -1.75
NSE3	YDR288W	ELP3	Q02908	557 aa	Known RBP	4.12	□□□□□ -1.75
NSE3	YDR288W	HER2	Q03557	464 aa		4.12	□□□□□ -1.75
NSE3	YDR288W	BCH1	Q05029	724 aa		4.12	□□□□□ -1.75
NSE3	YDR288W	NDE2	Q07500	545 aa		4.12	□□□□□ -1.75
NSE3	YDR288W	RPL1A	P0CX43	217 aa	Known RBP	4.11	□□□□□ -1.75
NSE3	YDR288W	RPL1B	P0CX44	217 aa	Known RBP	4.11	□□□□□ -1.75
NSE3	YDR288W	PHO91	P27514	894 aa		4.11	□□□□□ -1.75
NSE3	YDR288W	RRP1	P35178	278 aa	Predicted RBP	4.11	□□□□□ -1.75
NSE3	YDR288W	BLI1	P35727	113 aa		4.11	□□□□□ -1.75
NSE3	YDR288W	AVT5	P38176	459 aa		4.11	□□□□□ -1.75
NSE3	YDR288W	INM1	P38710	295 aa		4.11	□□□□□ -1.75
NSE3	YDR288W	STN1	P38960	494 aa		4.11	□□□□□ -1.75
NSE3	YDR288W	MMF1	P40185	145 aa	Known RBP	4.11	□□□□□ -1.75
NSE3	YDR288W	YPI1	P43587	155 aa		4.11	□□□□□ -1.75
NSE3	YDR288W	YGL242C	P53066	181 aa		4.11	□□□□□ -1.75
NSE3	YDR288W	YDR341C	Q05506	607 aa	Known RBP	4.11	□□□□□ -1.75
NSE3	YDR288W	TPT1	Q12272	230 aa	Known RBP	4.11	□□□□□ -1.75
NSE3	YDR288W	SNU66	Q12420	587 aa	Predicted RBP	4.11	□□□□□ -1.75
NSE3	YDR288W	RGT1	P32862	1170 aa		4.1	□□□□□ -1.75
NSE3	YDR288W	MNS1	P32906	549 aa		4.1	□□□□□ -1.75
NSE3	YDR288W	CHK1	P38147	527 aa		4.1	□□□□□ -1.75
NSE3	YDR288W	ROG1	P53118	685 aa		4.1	□□□□□ -1.75
NSE3	YDR288W	CWC25	P53854	179 aa	Known RBP	4.1	□□□□□ -1.75
NSE3	YDR288W	PEX25	Q02969	394 aa		4.1	□□□□□ -1.75
NSE3	YDR288W	SNT309	Q06091	175 aa	Predicted RBP	4.1	□□□□□ -1.75
NSE3	YDR288W	YRM1	Q12340	786 aa		4.1	□□□□□ -1.75
NSE3	YDR288W	TRP1	P00912	224 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	HSP82	P02829	709 aa	Known RBP	4.09	□□□□□ -1.75
NSE3	YDR288W	DAL2	P25335	343 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	YCL068C	P25593	260 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	NAM9	P27929	486 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	ARO2	P28777	376 aa	Known RBP	4.09	□□□□□ -1.75
NSE3	YDR288W	YBR139W	P38109	508 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	PFF1	P38244	976 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	YBR137W	P38276	179 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	CCE1	Q03702	353 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	NSE1	Q07913	336 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	ERV2	Q12284	196 aa		4.09	□□□□□ -1.75
NSE3	YDR288W	SLM5	P25345	492 aa	Known RBP	4.08	□□□□□ -1.76
NSE3	YDR288W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
NSE3	YDR288W	COX13	P32799	129 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	SKN1	P33336	771 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	RXT2	P38255	430 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	WSS1	P38838	269 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	YDR541C	Q03049	344 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	RSA1	Q08932	381 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	NCA2	Q12374	616 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	CEX1	Q12453	761 aa		4.08	□□□□□ -1.76
NSE3	YDR288W	ATP1	P07251	545 aa	Known RBP	4.07	□□□□□ -1.76
NSE3	YDR288W	NFT1	P0CE68	1218 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	PET123	P17558	318 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	RRP7	P25368	297 aa	Predicted RBP	4.07	□□□□□ -1.76
NSE3	YDR288W	KAP104	P38217	918 aa	Known RBP	4.07	□□□□□ -1.76
NSE3	YDR288W	GPI16	P38875	610 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	JLP2	P40206	208 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	YIL029C	P40538	142 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	TOS3	P43637	560 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	ALF1	P53904	254 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	HRI1	Q05905	244 aa	Known RBP	4.07	□□□□□ -1.76
NSE3	YDR288W	TLG2	Q08144	397 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms