RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	SPP2	Q02521	185 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	NUP116	Q02630	1113 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	MSC2	Q03455	724 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	EBS1	Q03466	884 aa	Known RBP	5.63	□□□□□ -1.51
CHL4	YDR254W	PLB2	Q03674	706 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	YMR310C	Q04867	317 aa	Predicted RBP	5.63	□□□□□ -1.51
CHL4	YDR254W	DUS4	Q06063	367 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	IPK1	Q06667	281 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	VPS36	Q06696	566 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	NSE1	Q07913	336 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	GEP3	Q08622	556 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
CHL4	YDR254W	GPM2	Q12008	311 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	YDL007C-A	Q2V2Q0	85 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	BNI1	P41832	1953 aa		5.63	□□□□□ -1.51
CHL4	YDR254W	HSL1	P34244	1518 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	COX2	P00410	251 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	GAL10	P04397	699 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	REV1	P12689	985 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	PMR1	P13586	950 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	HXT2	P23585	541 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	URK1	P27515	501 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	ECM25	P32525	599 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	SSO1	P32867	290 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	YOX1	P34161	385 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	CPR5	P35176	225 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	CBT1	P36038	271 aa	Predicted RBP	5.62	□□□□□ -1.51
CHL4	YDR254W	ARA1	P38115	344 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	DTR1	P38125	572 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	MMS21	P38632	267 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	PLB1	P39105	664 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	TFG2	P41896	400 aa	Predicted RBP	5.62	□□□□□ -1.51
CHL4	YDR254W	IDS2	P46958	469 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	YJL163C	P46996	555 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	AMA1	P50082	593 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	OCA2	P53949	197 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	SKI8	Q02793	397 aa	Predicted RBP	5.62	□□□□□ -1.51
CHL4	YDR254W	IRC4	Q03036	179 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	FAR8	Q05040	523 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	DIS3	Q08162	1001 aa	Known RBP	5.62	□□□□□ -1.51
CHL4	YDR254W	OSW2	Q12202	724 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	not detected
CHL4	YDR254W	YDR262W	Q12331	272 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	PRP46	Q12417	451 aa	Predicted RBP	5.62	□□□□□ -1.51
CHL4	YDR254W	UBA3	Q99344	299 aa		5.62	□□□□□ -1.51
CHL4	YDR254W	BPT1	P14772	1559 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	THP2	O13539	261 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	RPS24A	P0CX31	135 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	RPS24B	P0CX32	135 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	RPS16A	P0CX51	143 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	RPS16B	P0CX52	143 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	MRP13	P12686	339 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	FRS2	P15625	503 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	ISY1	P21374	235 aa	Predicted RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	PTC6	P25646	442 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	SKT5	P34226	696 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	ASC1	P38011	319 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	MNN2	P38069	597 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	EHT1	P38295	451 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	BIG1	P38813	335 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	SAK1	P38990	1142 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	RPH1	P39956	796 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	YIL108W	P40483	696 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	AGP3	P43548	558 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	SSY5	P47002	699 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	UBX6	P47049	396 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	NPA3	P47122	385 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	RPS7B	P48164	190 aa	Known RBP	5.61	□□□□□ -1.51
CHL4	YDR254W	YPT11	P48559	417 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	ROG1	P53118	685 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	YDC1	Q02896	317 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	AIM41	Q12032	185 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	VAM3	Q12241	283 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	SPO24	Q3E752	67 aa		5.61	□□□□□ -1.51
CHL4	YDR254W	YPT1	P01123	206 aa	Known RBP	5.6	□□□□□ -1.51
CHL4	YDR254W	CHS1	P08004	1131 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	MAS1	P10507	462 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	ALG1	P16661	449 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	SRP54	P20424	541 aa	Known RBP	5.6	□□□□□ -1.51
CHL4	YDR254W	GPI12	P23797	304 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	LRE1	P25579	583 aa	Known RBP	5.6	□□□□□ -1.51
CHL4	YDR254W	CSM1	P25651	190 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	NAM9	P27929	486 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	VMA6	P32366	345 aa	Known RBP	5.6	□□□□□ -1.51
CHL4	YDR254W	HMT1	P38074	348 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	SBE22	P38814	852 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	FET3	P38993	636 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	YER121W	P40076	114 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
CHL4	YDR254W	RTT101	P47050	842 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	STE24	P47154	453 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	SSN8	P47821	323 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	MSE1	P48525	536 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	NOP19	P53317	196 aa	Predicted RBP	5.6	□□□□□ -1.51
CHL4	YDR254W	AIM33	Q04516	312 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	ASM4	Q05166	528 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	CDA1	Q06702	301 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	YPD1	Q07688	167 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	MUM3	Q08750	479 aa		5.6	□□□□□ -1.51
CHL4	YDR254W	BAG7	Q12128	409 aa		5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms