RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W KAP95Q06142 861 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W YLR030WQ07967 263 aa2.01□□□□□ -2.09
SIR4YDR227W CHS5Q12114 671 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W DFG16Q99234 619 aa2.01□□□□□ -2.09
SIR4YDR227W RPL24AP04449 155 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W CDC37P06101 506 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W UTR1P21373 530 aa2.01□□□□□ -2.09
SIR4YDR227W ELO2P25358 347 aa2.01□□□□□ -2.09
SIR4YDR227W PET18P25362 215 aa2.01□□□□□ -2.09
SIR4YDR227W IMP2'P32351 346 aa2.01□□□□□ -2.09
SIR4YDR227W MRP20P32387 263 aa2.01□□□□□ -2.09
SIR4YDR227W LDB7P38210 180 aa2.01□□□□□ -2.09
SIR4YDR227W APD1P38281 316 aa2.01□□□□□ -2.09
SIR4YDR227W SIC1P38634 284 aa2.01□□□□□ -2.09
SIR4YDR227W CCT6P39079 546 aa2.01□□□□□ -2.09
SIR4YDR227W THO1P40040 218 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W LSM5P40089 93 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W GUS1P46655 708 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SIR4YDR227W CTF18P49956 741 aa2.01□□□□□ -2.09
SIR4YDR227W YGR018CP53211 109 aa2.01□□□□□ -2.09
SIR4YDR227W TWF1P53250 332 aa2.01□□□□□ -2.09
SIR4YDR227W CUR1Q06469 252 aa2.01□□□□□ -2.09
SIR4YDR227W VPS36Q06696 566 aa2.01□□□□□ -2.09
SIR4YDR227W THI3Q07471 609 aa2.01□□□□□ -2.09
SIR4YDR227W PUS9Q12069 462 aa2.01□□□□□ -2.09
SIR4YDR227W FMP16Q12497 93 aa2.01□□□□□ -2.09
SIR4YDR227W WHI2P12611 486 aa2.01□□□□□ -2.09
SIR4YDR227W CUP2P15315 225 aa2.01□□□□□ -2.09
SIR4YDR227W ARG1P22768 420 aa2.01□□□□□ -2.09
SIR4YDR227W SPB1P25582 841 aaPredicted RBP2.01□□□□□ -2.09
SIR4YDR227W YPS1P32329 569 aa2.01□□□□□ -2.09
SIR4YDR227W THI80P35202 319 aa2.01□□□□□ -2.09
SIR4YDR227W YKR015CP36111 568 aa2.01□□□□□ -2.09
SIR4YDR227W CBP4P37267 147 aa2.01□□□□□ -2.09
SIR4YDR227W CHK1P38147 527 aa2.01□□□□□ -2.09
SIR4YDR227W POP7P38291 140 aa2.01□□□□□ -2.09
SIR4YDR227W SPL2P38839 148 aa2.01□□□□□ -2.09
SIR4YDR227W GAB1P41733 394 aa2.01□□□□□ -2.09
SIR4YDR227W YJL163CP46996 555 aa2.01□□□□□ -2.09
SIR4YDR227W YGR149WP48236 432 aa2.01□□□□□ -2.09
SIR4YDR227W NOP15P53927 220 aaPredicted RBP2.01□□□□□ -2.09
SIR4YDR227W TY1A-MR1Q04215 440 aa2.01□□□□□ -2.09
SIR4YDR227W VPS20Q04272 221 aa2.01□□□□□ -2.09
SIR4YDR227W YEH1Q07804 573 aa2.01□□□□□ -2.09
SIR4YDR227W SVS1Q12254 260 aa2.01□□□□□ -2.09
SIR4YDR227W HRT3Q12347 344 aa2.01□□□□□ -2.09
SIR4YDR227W WTM1Q12363 437 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W RPL1AP0CX43 217 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W RPL1BP0CX44 217 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W GCD2P12754 651 aaPredicted RBP2.01□□□□□ -2.09
SIR4YDR227W DAP2P18962 818 aa2.01□□□□□ -2.09
SIR4YDR227W HOP1P20050 605 aa2.01□□□□□ -2.09
SIR4YDR227W KIN3P22209 435 aa2.01□□□□□ -2.09
SIR4YDR227W YEL043WP32618 956 aa2.01□□□□□ -2.09
SIR4YDR227W RPC34P32910 317 aa2.01□□□□□ -2.09
SIR4YDR227W LTV1P34078 463 aa2.01□□□□□ -2.09
SIR4YDR227W ADE17P38009 592 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W SLM4P38247 162 aa2.01□□□□□ -2.09
SIR4YDR227W MNN9P39107 395 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W CEM1P39525 442 aa2.01□□□□□ -2.09
SIR4YDR227W RPH1P39956 796 aa2.01□□□□□ -2.09
SIR4YDR227W CCT5P40413 562 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W TAH11P47112 604 aa2.01□□□□□ -2.09
SIR4YDR227W YDL183CP48569 320 aa2.01□□□□□ -2.09
SIR4YDR227W VEL1P53058 206 aa2.01□□□□□ -2.09
SIR4YDR227W GND2P53319 492 aa2.01□□□□□ -2.09
SIR4YDR227W ATG4P53867 494 aa2.01□□□□□ -2.09
SIR4YDR227W YLR036CQ07986 203 aa2.01□□□□□ -2.09
SIR4YDR227W TGS1Q12052 315 aa2.01□□□□□ -2.09
SIR4YDR227W SOD2P00447 233 aa2□□□□□ -2.09
SIR4YDR227W PMR1P13586 950 aa2□□□□□ -2.09
SIR4YDR227W CLB2P24869 491 aa2□□□□□ -2.09
SIR4YDR227W RPS5P26783 225 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W MRPL15P36523 253 aa2□□□□□ -2.09
SIR4YDR227W GIC1P38785 314 aa2□□□□□ -2.09
SIR4YDR227W ULP2P40537 1034 aaPredicted RBP2□□□□□ -2.09
SIR4YDR227W GLR1P41921 483 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W TOS3P43637 560 aa2□□□□□ -2.09
SIR4YDR227W RPA34P47006 233 aaPredicted RBP2□□□□□ -2.09
SIR4YDR227W ERV25P54837 211 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W NGL2Q03264 515 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W PBP4Q07362 185 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W XYL2Q07993 356 aa2□□□□□ -2.09
SIR4YDR227W RLM1Q12224 676 aa2□□□□□ -2.09
SIR4YDR227W ERG20P08524 352 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W UGA1P17649 471 aa2□□□□□ -2.09
SIR4YDR227W TRX3P25372 127 aa2□□□□□ -2.09
SIR4YDR227W IMG1P25626 169 aa2□□□□□ -2.09
SIR4YDR227W SPS19P32573 292 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W SSH1P38353 490 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W IME4P41833 600 aa2□□□□□ -2.09
SIR4YDR227W SDH1Q00711 640 aa2□□□□□ -2.09
SIR4YDR227W RNY1Q02933 434 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W YAP6Q03935 383 aa2□□□□□ -2.09
SIR4YDR227W COX20Q04935 205 aa2□□□□□ -2.09
SIR4YDR227W YPS7Q06325 596 aa2□□□□□ -2.09
SIR4YDR227W ALE1Q08548 619 aa2□□□□□ -2.09
SIR4YDR227W RPL20AP0CX23 172 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W RPL20BP0CX24 172 aaPredicted RBP2□□□□□ -2.09
SIR4YDR227W MRP13P12686 339 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms