RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	FRE1	P32791	686 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	CBP4	P37267	147 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	APL3	P38065	1025 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	TSC10	P38342	320 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	MBB1	P39534	108 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	SPG5	P42933	373 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	BUD17	P53727	317 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	YML053C	Q04978	212 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	YMR226C	Q05016	267 aa	Known RBP	4.39	□□□□□ -1.71
SPR28	YDR218C	DNL4	Q08387	944 aa	Predicted RBP	4.39	□□□□□ -1.71
SPR28	YDR218C	AFT2	Q08957	416 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	SLF1	Q12034	447 aa	Known RBP	4.39	□□□□□ -1.71
SPR28	YDR218C	MLH3	Q12083	715 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	DAP1	Q12091	152 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	LSP1	Q12230	341 aa	Known RBP	4.39	□□□□□ -1.71
SPR28	YDR218C	YDR262W	Q12331	272 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	YOR012W	Q12351	137 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	SEY1	Q99287	776 aa		4.39	□□□□□ -1.71
SPR28	YDR218C	SCEI	P03882	235 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	GAL4	P04386	881 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	AAC1	P04710	309 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	PRP16	P15938	1071 aa	Predicted RBP	4.38	□□□□□ -1.71
SPR28	YDR218C	RPL24B	P24000	155 aa	Known RBP	4.38	□□□□□ -1.71
SPR28	YDR218C	MGR1	P25573	417 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	SIN4	P32259	974 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	YSC83	P32792	385 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	IMP3	P32899	183 aa	Predicted RBP	4.38	□□□□□ -1.71
SPR28	YDR218C	ADE17	P38009	592 aa	Known RBP	4.38	□□□□□ -1.71
SPR28	YDR218C	QDR3	P38227	689 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	PCA1	P38360	1216 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	GPI16	P38875	610 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	STN1	P38960	494 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	BDH2	P39713	417 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	MTW1	P39731	289 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	YEL020C	P39994	560 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	RFC4	P40339	323 aa	Known RBP	4.38	□□□□□ -1.71
SPR28	YDR218C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SPR28	YDR218C	HSH155	P49955	971 aa	Known RBP	4.38	□□□□□ -1.71
SPR28	YDR218C	ZPR1	P53303	486 aa	Known RBP	4.38	□□□□□ -1.71
SPR28	YDR218C	COX20	Q04935	205 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	BUR2	Q05949	395 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	YDL057W	Q07379	328 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	YDL086W	Q07505	273 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	FRE7	Q12333	620 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	RMD5	Q12508	421 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	YBL111C	Q3E7Y5	667 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	LAG2	Q92325	660 aa		4.38	□□□□□ -1.71
SPR28	YDR218C	ADE4	P04046	510 aa	Known RBP	4.37	□□□□□ -1.71
SPR28	YDR218C	CHO2	P05374	869 aa	Known RBP	4.37	□□□□□ -1.71
SPR28	YDR218C	MSF1	P08425	469 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	SPO11	P23179	398 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	CWP1	P28319	239 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	SHP1	P34223	423 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	AIM29	P36154	155 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	INM1	P38710	295 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	SUR2	P38992	349 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	UTP25	P40498	721 aa	Known RBP	4.37	□□□□□ -1.71
SPR28	YDR218C	OPT1	P40897	799 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	CDC40	P40968	455 aa	Predicted RBP	4.37	□□□□□ -1.71
SPR28	YDR218C	HIT1	P46973	164 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	YJL118W	P47022	219 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	TAX4	P47030	604 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	YIP4	P53093	235 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	DIP5	P53388	608 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	BET4	Q00618	327 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	SPP2	Q02521	185 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	YMR178W	Q03219	274 aa	Known RBP	4.37	□□□□□ -1.71
SPR28	YDR218C	UFO1	Q04511	668 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	YLR283W	Q05867	314 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	PAM18	Q07914	168 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	THP1	Q08231	455 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	YOL075C	Q08234	1294 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	DSE3	Q08729	430 aa		4.37	□□□□□ -1.71
SPR28	YDR218C	PAA1	Q12447	191 aa	Known RBP	4.37	□□□□□ -1.71
SPR28	YDR218C	TDH2	P00358	332 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
SPR28	YDR218C	RAD7	P06779	565 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	RPL18A	P0CX49	186 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	RPL18B	P0CX50	186 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	RPS16A	P0CX51	143 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	RPS16B	P0CX52	143 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	PCT1	P13259	424 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	VPS1	P21576	704 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	AMD2	P22580	549 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	SLM5	P25345	492 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	YCP4	P25349	247 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	MSK1	P32048	576 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	CYS4	P32582	507 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	VPS51	P36116	164 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	IML3	P38265	245 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	VBA2	P38358	474 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	GAT2	P40209	560 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	ARG2	P40360	574 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	HAM1	P47119	197 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	RMR1	P53060	241 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	KAP114	P53067	1004 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	YNL181W	P53878	407 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	RSM23	Q01163	450 aa		4.36	□□□□□ -1.71
SPR28	YDR218C	YVH1	Q02256	364 aa	Known RBP	4.36	□□□□□ -1.71
SPR28	YDR218C	SHR3	Q02774	210 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms